(36 nodes) Ciliary transition zone network (Chrysemys picta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9D1	B9 domain-containing protein 1. (209 aa)
	ENSCPBP00000009641	annotation not available (78 aa)
	LCA5	Lebercilin LCA5. (688 aa)
	ENSCPBP00000033691	Meckelin-like. (586 aa)
	NPHP1	Nephrocystin 1. (702 aa)
	ENSCPBP00000034063	Coiled-coil and C2 domain-containing protein 2A-like. (139 aa)
	ENSCPBP00000034064	annotation not available (92 aa)
	TMEM80	Transmembrane protein 80. (220 aa)
	C5orf30	Chromosome 5 open reading frame 30. (202 aa)
	TCTN2	Tectonic family member 2. (653 aa)
	FAM161B	Family with sequence similarity 161 member B. (619 aa)
	FAM161A	Family with sequence similarity 161 member A. (621 aa)
	CFAP410	Cilla- and flagella-associated protein. (314 aa)
	ENSCPBP00000001765	Magnesium transporter NIPA2-like. (465 aa)
	NIPAL4	NIPA like domain containing 4. (372 aa)
	ARL3	ADP-ribosylation factor-like protein 3. (182 aa)
	TMEM237	Transmembrane protein 237. (399 aa)
	RPGRIP1	RPGR interacting protein 1. (1038 aa)
	UNC119B	Unc-119 lipid binding chaperone B. (239 aa)
	MKS1	Meckel syndrome type 1 protein. (565 aa)
	TMEM17	Transmembrane protein 17. (221 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (595 aa)
	SPATA7	Spermatogenesis-associated protein 7. (559 aa)
	TOPORS	TOP1 binding arginine/serine rich protein. (975 aa)
	TMEM67	Transmembrane protein 67. (983 aa)
	TCTN1	Tectonic family member 1. (282 aa)
	BICC1	BicC family RNA binding protein 1. (979 aa)
	CCSAP	Centriole, cilia and spindle associated protein. (269 aa)
	TTBK2	Tau tubulin kinase 2. (1291 aa)
	TMEM107	Transmembrane protein 107. (140 aa)
	IQCB1	IQ calmodulin-binding motif-containing protein 1. (596 aa)
	ENSCPBP00000021635	annotation not available (158 aa)
	TMEM216	Transmembrane protein 216. (255 aa)
	CC2D2A	Coiled-coil and C2 domain-containing protein 2A. (1621 aa)
	RP1L1	Retinitis pigmentosa 1. (322 aa)
	RPGRIP1L	Protein fantom. (1273 aa)

Your Current Organism:

Chrysemys picta

NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL3	ENSCPBP00000021635	ENSCPBP00000002918	ENSCPBP00000021635	ADP-ribosylation factor-like protein 3.	annotation not available	0.888
ARL3	IQCB1	ENSCPBP00000002918	ENSCPBP00000018961	ADP-ribosylation factor-like protein 3.	IQ calmodulin-binding motif-containing protein 1.	0.419
ARL3	NPHP1	ENSCPBP00000002918	ENSCPBP00000033711	ADP-ribosylation factor-like protein 3.	Nephrocystin 1.	0.411
ARL3	RPGRIP1L	ENSCPBP00000002918	ENSCPBP00000016547	ADP-ribosylation factor-like protein 3.	Protein fantom.	0.479
ARL3	UNC119B	ENSCPBP00000002918	ENSCPBP00000015277	ADP-ribosylation factor-like protein 3.	Unc-119 lipid binding chaperone B.	0.837
B9D1	CC2D2A	ENSCPBP00000029880	ENSCPBP00000025269	B9 domain-containing protein 1.	Coiled-coil and C2 domain-containing protein 2A.	0.777
B9D1	ENSCPBP00000033691	ENSCPBP00000029880	ENSCPBP00000033691	B9 domain-containing protein 1.	Meckelin-like.	0.816
B9D1	ENSCPBP00000034063	ENSCPBP00000029880	ENSCPBP00000034063	B9 domain-containing protein 1.	Coiled-coil and C2 domain-containing protein 2A-like.	0.777
B9D1	ENSCPBP00000034064	ENSCPBP00000029880	ENSCPBP00000034064	B9 domain-containing protein 1.	annotation not available	0.777
B9D1	IQCB1	ENSCPBP00000029880	ENSCPBP00000018961	B9 domain-containing protein 1.	IQ calmodulin-binding motif-containing protein 1.	0.457
B9D1	MKS1	ENSCPBP00000029880	ENSCPBP00000013219	B9 domain-containing protein 1.	Meckel syndrome type 1 protein.	0.928
B9D1	NPHP1	ENSCPBP00000029880	ENSCPBP00000033711	B9 domain-containing protein 1.	Nephrocystin 1.	0.672
B9D1	RPGRIP1L	ENSCPBP00000029880	ENSCPBP00000016547	B9 domain-containing protein 1.	Protein fantom.	0.578
B9D1	TCTN1	ENSCPBP00000029880	ENSCPBP00000004019	B9 domain-containing protein 1.	Tectonic family member 1.	0.915
B9D1	TCTN2	ENSCPBP00000029880	ENSCPBP00000037479	B9 domain-containing protein 1.	Tectonic family member 2.	0.792
B9D1	TMEM107	ENSCPBP00000029880	ENSCPBP00000018349	B9 domain-containing protein 1.	Transmembrane protein 107.	0.643
B9D1	TMEM17	ENSCPBP00000029880	ENSCPBP00000012549	B9 domain-containing protein 1.	Transmembrane protein 17.	0.644
B9D1	TMEM216	ENSCPBP00000029880	ENSCPBP00000024903	B9 domain-containing protein 1.	Transmembrane protein 216.	0.890
B9D1	TMEM237	ENSCPBP00000029880	ENSCPBP00000015823	B9 domain-containing protein 1.	Transmembrane protein 237.	0.590
B9D1	TMEM67	ENSCPBP00000029880	ENSCPBP00000003770	B9 domain-containing protein 1.	Transmembrane protein 67.	0.895