STRINGSTRING
CLIP3 CLIP3 Ran Ran EHD4 EHD4 Rab11fip1 Rab11fip1 Snx18 Snx18 CLCN4 CLCN4 Rab13 Rab13 PLA2G5 PLA2G5 VPS53 VPS53 Rab15 Rab15 SORL1 SORL1 MICALL1 MICALL1 ACAP1 ACAP1 TNIK TNIK TFRC TFRC SYT11 SYT11 RAB12 RAB12 LOC104874513 LOC104874513 H920_10635 H920_10635 GPER1 GPER1 VAMP3 VAMP3 AQP2 AQP2 RASSF9 RASSF9 Cln3 Cln3 SCAMP3 SCAMP3 EIPR1 EIPR1 Rab4b Rab4b PHETA2 PHETA2 LZTR1 LZTR1 PLA2G3 PLA2G3 BAIAP3 BAIAP3 ATP13A4 ATP13A4 ABCG1 ABCG1 RAP2A RAP2A ACKR2 ACKR2 RAB11FIP3 RAB11FIP3 ABHD17B ABHD17B DENND6A DENND6A ACKR1 ACKR1 VPS52 VPS52 RAB8A RAB8A RAP2B RAP2B LOC104872007 LOC104872007 NEU3 NEU3 TMEM230 TMEM230 AMOTL2 AMOTL2 TPP1 TPP1 C1orf210 C1orf210 RAB25 RAB25 SGK3 SGK3 ARF6 ARF6 RAB11B RAB11B TBC1D14 TBC1D14 SH3TC2 SH3TC2 FZD7 FZD7 Atg9a Atg9a LTF LTF LOC104865308 LOC104865308 Uts2r Uts2r RAP2C RAP2C APP APP VIPAS39 VIPAS39 LDLRAP1 LDLRAP1 ITSN1 ITSN1 TUBGCP4 TUBGCP4 EHD3 EHD3 DENND6B DENND6B ABHD17A ABHD17A TF TF SYT5 SYT5 ATP11C ATP11C SLC31A2 SLC31A2 NDRG1 NDRG1 PIGR PIGR UNC13D UNC13D BOK BOK KCNK1 KCNK1 ABCB11 ABCB11 GGA3 GGA3 VPS16 VPS16 VTI1B VTI1B RAB11FIP5 RAB11FIP5 MICALL2 MICALL2 GRIA1 GRIA1 LOC104864384 LOC104864384 ENSFDAP00000007522 ENSFDAP00000007522 PACSIN2 PACSIN2 STX8 STX8 NTRK1 NTRK1 PDLIM4 PDLIM4 EHD2 EHD2 LOC104863160 LOC104863160 AVL9 AVL9 ATP11B ATP11B ARFGEF2 ARFGEF2 SLC36A2 SLC36A2 SLC9A7 SLC9A7 ZDHHC2 ZDHHC2 GRIPAP1 GRIPAP1 MELTF MELTF MLC1 MLC1 CMTM6 CMTM6 AP1G1 AP1G1 FCHSD2 FCHSD2 ENSFDAP00000002370 ENSFDAP00000002370 ENSFDAP00000002462 ENSFDAP00000002462 VAMP8 VAMP8 SCAMP2 SCAMP2 SLC39A4 SLC39A4 OPTN OPTN RFFL RFFL STX7 STX7 DENND2B DENND2B SCAMP1 SCAMP1 Plekhj1 Plekhj1 ACKR3 ACKR3 COMMD1 COMMD1 SNF8 SNF8 LAMP5 LAMP5 TNF TNF INPP4A INPP4A ENTR1 ENTR1 RAC1 RAC1 RAB29 RAB29 RAB11A RAB11A RAB4A RAB4A MYO5A MYO5A GPR161 GPR161 CD22 CD22 VPS50 VPS50 MCTP1 MCTP1 ST8SIA2 ST8SIA2 CLCN3 CLCN3 Myo5b Myo5b INPP5F INPP5F ZFYVE27 ZFYVE27 TMUB1 TMUB1 ATP11A ATP11A SH3TC1 SH3TC1 ITGB1 ITGB1 RAB14 RAB14 NSG1 NSG1 BACE1 BACE1 MCOLN2 MCOLN2 CFTR CFTR EHD1 EHD1 NISCH NISCH SORCS2 SORCS2 RABEP1 RABEP1 RAB10 RAB10 DYNC1I1 DYNC1I1 VPS51 VPS51 STX12 STX12 LMTK2 LMTK2 TPCN1 TPCN1 FCHSD1 FCHSD1 ATP9A ATP9A SLC9A9 SLC9A9 ATP13A3 ATP13A3 SCAMP4 SCAMP4 RELCH RELCH SLC9A6 SLC9A6 SLC31A1 SLC31A1 Vps33b Vps33b RAB11FIP4 RAB11FIP4 SCAMP5 SCAMP5 H920_04487 H920_04487 ARHGAP44 ARHGAP44 SLC1A1 SLC1A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLIP3CAP-Gly domain-containing linker protein 3. (547 aa)
RanGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (209 aa)
EHD4EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (479 aa)
Rab11fip1Rab11 family-interacting protein 1. (639 aa)
Snx18Sorting nexin-18. (333 aa)
CLCN4Chloride channel protein. (747 aa)
Rab13RAB13, member RAS oncogene family. (132 aa)
PLA2G5Phospholipase A(2). (138 aa)
VPS53Vacuolar protein sorting-associated protein 53 like protein. (832 aa)
Rab15RAB15, member RAS oncogene family. (184 aa)
SORL1Sortilin-related receptor. (2119 aa)
MICALL1MICAL-like protein 1. (771 aa)
ACAP1Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1. (552 aa)
TNIKTRAF2 and NCK-interacting protein kinase. (1360 aa)
TFRCTransferrin receptor protein 1. (765 aa)
SYT11Synaptotagmin-11. (431 aa)
RAB12Ras-related protein Rab-12. (168 aa)
LOC104874513Battenin. (75 aa)
H920_10635Ras-related protein Rab-15. (201 aa)
GPER1G-protein coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (375 aa)
VAMP3Vesicle-associated membrane protein 3. (99 aa)
AQP2Aquaporin-2; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
RASSF9Ras association domain-containing protein 9. (435 aa)
Cln3Battenin. (442 aa)
SCAMP3Secretory carrier-associated membrane protein. (353 aa)
EIPR1EARP complex and GARP complex interacting protein 1. (387 aa)
Rab4bRas-related protein Rab-4B. (215 aa)
PHETA2PH domain containing endocytic trafficking adaptor 2. (259 aa)
LZTR1Leucine-zipper-like transcriptional regulator 1. (839 aa)
PLA2G3Group 3 secretory phospholipase A2. (508 aa)
BAIAP3BAI1-associated protein 3. (1152 aa)
ATP13A4Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1170 aa)
ABCG1ATP-binding cassette sub-family G member 1. (618 aa)
RAP2ARas-related protein Rap-2a. (183 aa)
ACKR2Chemokine-binding protein 2; Belongs to the G-protein coupled receptor 1 family. (512 aa)
RAB11FIP3Rab11 family-interacting protein 3. (446 aa)
ABHD17BAbhydrolase domain-containing protein FAM108B1. (288 aa)
DENND6ADENN domain containing 6A. (529 aa)
ACKR1Duffy antigen/chemokine receptor. (335 aa)
VPS52Vacuolar protein sorting-associated protein 52 like protein. (723 aa)
RAB8ARAB8A, member RAS oncogene family. (187 aa)
RAP2BRas-related protein Rap-2b. (183 aa)
LOC104872007Two pore calcium channel protein 2. (711 aa)
NEU3Sialidase-3. (437 aa)
TMEM230Uncharacterized protein. (120 aa)
AMOTL2Angiomotin-like protein 2. (762 aa)
TPP1Tripeptidyl-peptidase 1. (563 aa)
C1orf210Uncharacterized protein. (112 aa)
RAB25Ras-related protein Rab-25. (213 aa)
SGK3Serine/threonine-protein kinase Sgk3. (496 aa)
ARF6ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
RAB11BRas-related protein Rab-11B. (218 aa)
TBC1D14TBC1 domain family member 14. (412 aa)
SH3TC2SH3 domain and tetratricopeptide repeats-containing protein 2. (1288 aa)
FZD7Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family. (558 aa)
Atg9aAutophagy-related protein 9A. (839 aa)
LTFLactotransferrin; Belongs to the transferrin family. (715 aa)
LOC104865308Neuroendocrine secretory protein 55. (229 aa)
Uts2rUrotensin-2 receptor; Belongs to the G-protein coupled receptor 1 family. (377 aa)
RAP2CRas-related protein Rap-2c. (183 aa)
APPAmyloid beta A4 protein. (766 aa)
VIPAS39VPS33B-interacting protein. (493 aa)
LDLRAP1Low density lipoprotein receptor adapter protein 1. (278 aa)
ITSN1Intersectin-1. (1716 aa)
TUBGCP4Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (666 aa)
EHD3EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
DENND6BDENN domain containing 6B. (539 aa)
ABHD17AAbhydrolase domain-containing protein FAM108A. (310 aa)
TFSerotransferrin. (695 aa)
SYT5Synaptotagmin 5. (337 aa)
ATP11CPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1123 aa)
SLC31A2Putative low affinity copper uptake protein 2. (141 aa)
NDRG1Protein NDRG1. (374 aa)
PIGRPolymeric immunoglobulin receptor. (772 aa)
UNC13DProtein unc-13 like protein D. (1087 aa)
BOKBcl-2-related ovarian killer protein. (146 aa)
KCNK1Potassium two pore domain channel subfamily K member 1. (332 aa)
ABCB11Bile salt export pump. (1321 aa)
GGA3ADP-ribosylation factor-binding protein GGA3. (726 aa)
VPS16Vacuolar protein sorting-associated protein 16 like protein. (838 aa)
VTI1BVesicle transport through interaction with t-SNAREs 1B. (193 aa)
RAB11FIP5Rab11 family-interacting protein 5. (547 aa)
MICALL2MICAL like 2. (763 aa)
GRIA1Glutamate receptor 1. (906 aa)
LOC104864384Natural resistance-associated macrophage protein 2. (200 aa)
ENSFDAP00000007522annotation not available (94 aa)
PACSIN2Protein kinase C and casein kinase substrate in neurons 2. (470 aa)
STX8Syntaxin-8. (236 aa)
NTRK1Tyrosine-protein kinase receptor. (727 aa)
PDLIM4PDZ and LIM domain 4. (312 aa)
EHD2EH domain-containing protein 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (539 aa)
LOC104863160Inhibitor of carbonic anhydrase; Belongs to the transferrin family. (700 aa)
AVL9AVL9 cell migration associated. (611 aa)
ATP11BPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1168 aa)
ARFGEF2Brefeldin A-inhibited guanine nucleotide-exchange protein 2. (1770 aa)
SLC36A2Proton-coupled amino acid transporter 2. (410 aa)
SLC9A7Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (710 aa)
ZDHHC2Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (322 aa)
GRIPAP1GRIP1-associated protein 1. (841 aa)
MELTFMelanotransferrin; Belongs to the transferrin family. (617 aa)
MLC1Modulator of VRAC current 1. (382 aa)
CMTM6CKLF like MARVEL transmembrane domain containing 6. (156 aa)
AP1G1AP-1 complex subunit gamma. (825 aa)
FCHSD2FCH and double SH3 domains protein 2. (764 aa)
ENSFDAP00000002370annotation not available (145 aa)
ENSFDAP00000002462annotation not available (192 aa)
VAMP8Vesicle-associated membrane protein 8. (101 aa)
SCAMP2Secretory carrier membrane protein 2. (329 aa)
SLC39A4Zinc transporter ZIP4. (584 aa)
OPTNOptineurin. (599 aa)
RFFLE3 ubiquitin-protein ligase rififylin. (366 aa)
STX7Syntaxin-7; Belongs to the syntaxin family. (261 aa)
DENND2BSuppression of tumorigenicity 5 protein. (1137 aa)
SCAMP1Secretory carrier-associated membrane protein. (319 aa)
Plekhj1Pleckstrin homology domain-containing family J member 1. (164 aa)
ACKR3Atypical chemokine receptor 3. (362 aa)
COMMD1COMM domain-containing protein 1. (188 aa)
SNF8Vacuolar-sorting protein SNF8. (228 aa)
LAMP5Uncharacterized protein. (280 aa)
TNFTumor necrosis factor; Belongs to the tumor necrosis factor family. (232 aa)
INPP4AType I inositol-3,4-bisphosphate 4-phosphatase. (962 aa)
ENTR1Serologically defined colon cancer antigen 3 like protein. (355 aa)
RAC1Ras-related C3 botulinum toxin substrate 1. (199 aa)
RAB29Nuclear ubiquitous casein and cyclin-dependent kinases substrate. (204 aa)
RAB11ARas-related protein Rab-11A. (216 aa)
RAB4ARas-related protein Rab-4A. (207 aa)
MYO5AMyosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1846 aa)
GPR161G-protein coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (542 aa)
CD22B-cell receptor CD22. (843 aa)
VPS50Coiled-coil domain-containing protein 132. (964 aa)
MCTP1Multiple C2 and transmembrane domain-containing protein 1. (777 aa)
ST8SIA2Alpha-2,8-sialyltransferase 8B; Belongs to the glycosyltransferase 29 family. (342 aa)
CLCN3Chloride channel protein. (866 aa)
Myo5bMyosin-Vb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1827 aa)
INPP5FPhosphatidylinositide phosphatase SAC2. (1098 aa)
ZFYVE27Protrudin. (411 aa)
TMUB1Transmembrane and ubiquitin-like domain-containing protein 1. (246 aa)
ATP11AATPase phospholipid transporting 11A. (1129 aa)
SH3TC1SH3 domain and tetratricopeptide repeats-containing protein 1. (1214 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (803 aa)
RAB14Ras-related protein Rab-14. (215 aa)
NSG1Zinc finger and BTB domain-containing protein 49. (191 aa)
BACE1Beta-secretase 1; Belongs to the peptidase A1 family. (478 aa)
MCOLN2Mucolipin-2. (540 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1480 aa)
EHD1EH domain-containing protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (534 aa)
NISCHNischarin. (1490 aa)
SORCS2VPS10 domain-containing receptor SorCS2. (1050 aa)
RABEP1Rab GTPase-binding effector protein 1. (857 aa)
RAB10Ras-related protein Rab-10. (200 aa)
DYNC1I1Cytoplasmic dynein 1 intermediate chain 1. (628 aa)
VPS51Protein fat-free like protein. (781 aa)
STX12Syntaxin 12. (274 aa)
LMTK2Serine/threonine-protein kinase LMTK2. (1498 aa)
TPCN1Two pore calcium channel protein 1. (819 aa)
FCHSD1FCH and double SH3 domains protein 1. (688 aa)
ATP9APhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1024 aa)
SLC9A9Sodium/hydrogen exchanger 9. (644 aa)
ATP13A3Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1231 aa)
SCAMP4Secretory carrier-associated membrane protein. (230 aa)
RELCHLisH domain and HEAT repeat-containing protein KIAA1468. (1216 aa)
SLC9A6Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (657 aa)
SLC31A1High affinity copper uptake protein 1. (191 aa)
Vps33bVacuolar protein sorting-associated protein 33B. (617 aa)
RAB11FIP4Rab11 family-interacting protein 4. (585 aa)
SCAMP5Secretory carrier-associated membrane protein. (235 aa)
H920_04487Putative phospholipid-transporting ATPase IF. (201 aa)
ARHGAP44Rho GTPase-activating protein 44. (822 aa)
SLC1A1Excitatory amino acid transporter 3. (491 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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