STRINGSTRING
SMURF1 SMURF1 TGFBR2 TGFBR2 ENSFDAP00000002920 ENSFDAP00000002920 Cgn Cgn F11R F11R PARD3 PARD3 Arhgef18 Arhgef18 TGFBR1 TGFBR1 PARD6A PARD6A RPS27A RPS27A Ubc Ubc TGFB1 TGFB1 UBA52 UBA52 RHOA RHOA PARD3B PARD3B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMURF1E3 ubiquitin-protein ligase SMURF1. (744 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (560 aa)
ENSFDAP00000002920annotation not available (87 aa)
CgnCingulin. (916 aa)
F11RJunctional adhesion molecule A. (299 aa)
PARD3Partitioning defective 3 like protein. (1270 aa)
Arhgef18Rho guanine nucleotide exchange factor 18. (788 aa)
TGFBR1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (470 aa)
PARD6APartitioning defective 6 like protein alpha. (347 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
UbcPolyubiquitin-B. (235 aa)
TGFB1Transforming growth factor beta-1. (333 aa)
UBA52KxDL motif containing 1. (232 aa)
RHOATransforming protein RhoA. (193 aa)
PARD3BPartitioning defective 3 like protein B. (1166 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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