(12 nodes) Response to UV-C network (Pavo cristatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POLH	DNA polymerase eta. (693 aa)
	DCUN1D3	Defective in cullin neddylation 1 domain containing 3. (304 aa)
	BAK1	BCL2 antagonist/killer 1. (280 aa)
	ENSPSTP00000020995	annotation not available (125 aa)
	ENSPSTP00000023568	annotation not available (421 aa)
	C9orf116	Chromosome 9 open reading frame 116. (123 aa)
	ENSPSTP00000011613	annotation not available (125 aa)
	ENSPSTP00000011622	annotation not available (520 aa)
	ENSPSTP00000010412	annotation not available (2680 aa)
	WRN	WRN RecQ like helicase. (1407 aa)
	ENSPSTP00000004965	annotation not available (129 aa)
	ENSPSTP00000004979	annotation not available (272 aa)

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000004965	ENSPSTP00000004979	ENSPSTP00000004965	ENSPSTP00000004979	annotation not available	annotation not available	0.649
ENSPSTP00000004965	ENSPSTP00000010412	ENSPSTP00000004965	ENSPSTP00000010412	annotation not available	annotation not available	0.611
ENSPSTP00000004965	ENSPSTP00000023568	ENSPSTP00000004965	ENSPSTP00000023568	annotation not available	annotation not available	0.611
ENSPSTP00000004965	POLH	ENSPSTP00000004965	ENSPSTP00000007247	annotation not available	DNA polymerase eta.	0.559
ENSPSTP00000004965	WRN	ENSPSTP00000004965	ENSPSTP00000001808	annotation not available	WRN RecQ like helicase.	0.997
ENSPSTP00000004979	ENSPSTP00000004965	ENSPSTP00000004979	ENSPSTP00000004965	annotation not available	annotation not available	0.649
ENSPSTP00000004979	ENSPSTP00000010412	ENSPSTP00000004979	ENSPSTP00000010412	annotation not available	annotation not available	0.611
ENSPSTP00000004979	ENSPSTP00000023568	ENSPSTP00000004979	ENSPSTP00000023568	annotation not available	annotation not available	0.611
ENSPSTP00000004979	POLH	ENSPSTP00000004979	ENSPSTP00000007247	annotation not available	DNA polymerase eta.	0.559
ENSPSTP00000004979	WRN	ENSPSTP00000004979	ENSPSTP00000001808	annotation not available	WRN RecQ like helicase.	0.997
ENSPSTP00000010412	ENSPSTP00000004965	ENSPSTP00000010412	ENSPSTP00000004965	annotation not available	annotation not available	0.611
ENSPSTP00000010412	ENSPSTP00000004979	ENSPSTP00000010412	ENSPSTP00000004979	annotation not available	annotation not available	0.611
ENSPSTP00000010412	POLH	ENSPSTP00000010412	ENSPSTP00000007247	annotation not available	DNA polymerase eta.	0.535
ENSPSTP00000010412	WRN	ENSPSTP00000010412	ENSPSTP00000001808	annotation not available	WRN RecQ like helicase.	0.975
ENSPSTP00000011613	ENSPSTP00000011622	ENSPSTP00000011613	ENSPSTP00000011622	annotation not available	annotation not available	0.718
ENSPSTP00000011622	ENSPSTP00000011613	ENSPSTP00000011622	ENSPSTP00000011613	annotation not available	annotation not available	0.718
ENSPSTP00000011622	ENSPSTP00000020995	ENSPSTP00000011622	ENSPSTP00000020995	annotation not available	annotation not available	0.718
ENSPSTP00000020995	ENSPSTP00000011622	ENSPSTP00000020995	ENSPSTP00000011622	annotation not available	annotation not available	0.718
ENSPSTP00000023568	ENSPSTP00000004965	ENSPSTP00000023568	ENSPSTP00000004965	annotation not available	annotation not available	0.611
ENSPSTP00000023568	ENSPSTP00000004979	ENSPSTP00000023568	ENSPSTP00000004979	annotation not available	annotation not available	0.611