(10 nodes) K Homology domain, type 1 superfamily network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_014555	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (403 aa)
	CVT25_007034	Uncharacterized protein. (498 aa)
	CVT25_010184	Uncharacterized protein. (342 aa)
	CVT25_001354	Uncharacterized protein. (395 aa)
	CVT25_015260	KH domain-containing protein. (294 aa)
	CVT25_014969	Uncharacterized protein. (996 aa)
	CVT25_004316	Uncharacterized protein. (233 aa)
	CVT25_011062	Uncharacterized protein. (1229 aa)
	CVT25_002512	Uncharacterized protein. (334 aa)
	CVT25_014064	Uncharacterized protein. (435 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_002512	CVT25_004316	A0A409XUQ1	A0A409XQ08	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT25_002512	CVT25_014555	A0A409XUQ1	A0A409WRG8	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.949
CVT25_002512	CVT25_015260	A0A409XUQ1	A0A409XR24	Uncharacterized protein.	KH domain-containing protein.	0.780
CVT25_004316	CVT25_002512	A0A409XQ08	A0A409XUQ1	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT25_004316	CVT25_014555	A0A409XQ08	A0A409WRG8	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.954
CVT25_004316	CVT25_015260	A0A409XQ08	A0A409XR24	Uncharacterized protein.	KH domain-containing protein.	0.777
CVT25_010184	CVT25_011062	A0A409XCT1	A0A409WFD7	Uncharacterized protein.	Uncharacterized protein.	0.466
CVT25_011062	CVT25_010184	A0A409WFD7	A0A409XCT1	Uncharacterized protein.	Uncharacterized protein.	0.466
CVT25_011062	CVT25_014064	A0A409WFD7	A0A409VPH3	Uncharacterized protein.	Uncharacterized protein.	0.466
CVT25_014064	CVT25_011062	A0A409VPH3	A0A409WFD7	Uncharacterized protein.	Uncharacterized protein.	0.466
CVT25_014555	CVT25_002512	A0A409WRG8	A0A409XUQ1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.949
CVT25_014555	CVT25_004316	A0A409WRG8	A0A409XQ08	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.954
CVT25_014555	CVT25_015260	A0A409WRG8	A0A409XR24	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH domain-containing protein.	0.974
CVT25_015260	CVT25_002512	A0A409XR24	A0A409XUQ1	KH domain-containing protein.	Uncharacterized protein.	0.780
CVT25_015260	CVT25_004316	A0A409XR24	A0A409XQ08	KH domain-containing protein.	Uncharacterized protein.	0.777
CVT25_015260	CVT25_014555	A0A409XR24	A0A409WRG8	KH domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.974