STRINGSTRING
gcvH gcvH hemA hemA CFR80_00490 CFR80_00490 CFR80_00625 CFR80_00625 lpdA lpdA CFR80_01665 CFR80_01665 CFR80_07190 CFR80_07190 CFR80_03235 CFR80_03235 asd asd arsC-2 arsC-2 CFR80_14980 CFR80_14980 serB serB CFR80_05730 CFR80_05730 CFR80_11485 CFR80_11485 arsC arsC CFR80_15610 CFR80_15610 GCA_000227565_00183 GCA_000227565_00183 GCA_000227565_00088 GCA_000227565_00088 GCA_000227565_00051 GCA_000227565_00051 GCA_000227565_00045 GCA_000227565_00045 GCA_000227565_00006 GCA_000227565_00006 CFR80_05110 CFR80_05110 trpA trpA trpB trpB CFR80_01280 CFR80_01280 gcvT gcvT gcvP gcvP CFR80_04940 CFR80_04940 glyA glyA CFR80_10250 CFR80_10250 CFR80_05340 CFR80_05340 CFR80_05490 CFR80_05490 gpmI gpmI CFR80_01995 CFR80_01995 CFR80_02150 CFR80_02150 thrB thrB pqqC pqqC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gcvHUnannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (121 aa)
hemAUnannotated protein. (426 aa)
CFR80_00490Unannotated protein. (441 aa)
CFR80_00625Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (393 aa)
lpdAUnannotated protein. (469 aa)
CFR80_01665Unannotated protein. (590 aa)
CFR80_07190Unannotated protein. (196 aa)
CFR80_03235Unannotated protein. (578 aa)
asdUnannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (339 aa)
arsC-2Unannotated protein. (121 aa)
CFR80_14980Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
serBUnannotated protein. (302 aa)
CFR80_05730Unannotated protein. (327 aa)
CFR80_11485Unannotated protein. (445 aa)
arsCUnannotated protein. (140 aa)
CFR80_15610Unannotated protein. (199 aa)
GCA_000227565_00183Unannotated protein. (94 aa)
GCA_000227565_00088Unannotated protein. (94 aa)
GCA_000227565_00051Unannotated protein. (248 aa)
GCA_000227565_00045Unannotated protein. (203 aa)
GCA_000227565_00006Unannotated protein. (203 aa)
CFR80_05110Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (421 aa)
trpAUnannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (274 aa)
trpBUnannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (453 aa)
CFR80_01280Unannotated protein. (467 aa)
gcvTUnannotated protein. (377 aa)
gcvPUnannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (961 aa)
CFR80_04940Unannotated protein; Belongs to the aspartokinase family. (417 aa)
glyAUnannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (433 aa)
CFR80_10250Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (320 aa)
CFR80_05340Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
CFR80_05490Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (322 aa)
gpmIUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (517 aa)
CFR80_01995Unannotated protein. (398 aa)
CFR80_02150Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (285 aa)
thrBUnannotated protein; Belongs to the pseudomonas-type ThrB family. (322 aa)
pqqCUnannotated protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. (245 aa)
Your Current Organism:
Komagataeibacter oboediens
NCBI taxonomy Id: 940286
Other names: Gluconacetobacter oboediens 174Bp2, K. oboediens 174Bp2, Komagataeibacter oboediens 174Bp2, Komagataeibacter oboediens str. 174Bp2, Komagataeibacter oboediens strain 174Bp2
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