STRINGSTRING
PTSG_00169 PTSG_00169 PTSG_01904 PTSG_01904 PTSG_03761 PTSG_03761 PTSG_03629 PTSG_03629 PTSG_05241 PTSG_05241 PTSG_10474 PTSG_10474 PTSG_11441 PTSG_11441
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00169CBP-A protein. (2186 aa)
PTSG_01904Hdac1 protein. (677 aa)
PTSG_03761Tgs1 protein. (821 aa)
PTSG_03629SANT domain-containing protein. (616 aa)
PTSG_05241Uncharacterized protein. (468 aa)
PTSG_10474Uncharacterized protein. (2501 aa)
PTSG_11441Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (355 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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