(17 nodes) Mitotic Telophase/Cytokinesis, and Smc5-Smc6 complex network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_00177	Uncharacterized protein. (1492 aa)
	PTSG_00311	Uncharacterized protein. (837 aa)
	PTSG_00894	Uncharacterized protein. (492 aa)
	PTSG_01740	Chalcone_isomerase domain-containing protein. (268 aa)
	PTSG_02263	SCD domain-containing protein. (1345 aa)
	PTSG_11869	Sister chromatid cohesion protein. (1586 aa)
	PTSG_02453	MAGE domain-containing protein. (389 aa)
	PTSG_02778	SMC_N domain-containing protein. (1157 aa)
	PTSG_03625	Rad21_Rec8_N domain-containing protein. (857 aa)
	PTSG_04404	Uncharacterized protein. (583 aa)
	PTSG_05184	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (336 aa)
	PTSG_07170	WAPL domain-containing protein. (1108 aa)
	PTSG_07983	Structural maintenance of chromosomes protein. (1206 aa)
	PTSG_07521	Structural maintenance of chromosomes protein. (1240 aa)
	PTSG_08161	SMC_N domain-containing protein. (950 aa)
	PTSG_12694	PH domain-containing protein. (1183 aa)
	PTSG_07272	Uncharacterized protein. (578 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00177	PTSG_00311	F2TVR0	F2TW45	Uncharacterized protein.	Uncharacterized protein.	0.888
PTSG_00177	PTSG_00894	F2TVR0	F2TXS8	Uncharacterized protein.	Uncharacterized protein.	0.951
PTSG_00177	PTSG_02263	F2TVR0	F2U1P2	Uncharacterized protein.	SCD domain-containing protein.	0.983
PTSG_00177	PTSG_02778	F2TVR0	F2U3A4	Uncharacterized protein.	SMC_N domain-containing protein.	0.859
PTSG_00177	PTSG_03625	F2TVR0	F2U648	Uncharacterized protein.	Rad21_Rec8_N domain-containing protein.	0.888
PTSG_00177	PTSG_04404	F2TVR0	F2U8G5	Uncharacterized protein.	Uncharacterized protein.	0.998
PTSG_00177	PTSG_07170	F2TVR0	F2UE96	Uncharacterized protein.	WAPL domain-containing protein.	0.979
PTSG_00177	PTSG_07272	F2TVR0	F2UIY3	Uncharacterized protein.	Uncharacterized protein.	0.888
PTSG_00177	PTSG_07521	F2TVR0	F2UH03	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.985
PTSG_00177	PTSG_07983	F2TVR0	F2UGW9	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.989
PTSG_00177	PTSG_08161	F2TVR0	F2UI64	Uncharacterized protein.	SMC_N domain-containing protein.	0.898
PTSG_00177	PTSG_11869	F2TVR0	F2U1W0	Uncharacterized protein.	Sister chromatid cohesion protein.	0.947
PTSG_00177	PTSG_12694	F2TVR0	F2UIC4	Uncharacterized protein.	PH domain-containing protein.	0.899
PTSG_00311	PTSG_00177	F2TW45	F2TVR0	Uncharacterized protein.	Uncharacterized protein.	0.888
PTSG_00311	PTSG_00894	F2TW45	F2TXS8	Uncharacterized protein.	Uncharacterized protein.	0.756
PTSG_00311	PTSG_02263	F2TW45	F2U1P2	Uncharacterized protein.	SCD domain-containing protein.	0.896
PTSG_00311	PTSG_02778	F2TW45	F2U3A4	Uncharacterized protein.	SMC_N domain-containing protein.	0.744
PTSG_00311	PTSG_05184	F2TW45	F2UAR3	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.593
PTSG_00311	PTSG_07170	F2TW45	F2UE96	Uncharacterized protein.	WAPL domain-containing protein.	0.696
PTSG_00311	PTSG_07521	F2TW45	F2UH03	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.908

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