STRINGSTRING
PTSG_00435 PTSG_00435 PTSG_02477 PTSG_02477 PTSG_03185 PTSG_03185 PTSG_03333 PTSG_03333 PTSG_03467 PTSG_03467 PTSG_03905 PTSG_03905 PTSG_04654 PTSG_04654 PTSG_05591 PTSG_05591 PTSG_05637 PTSG_05637 PTSG_06701 PTSG_06701 PTSG_06665 PTSG_06665 EIF6 EIF6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00435Zinc finger protein. (174 aa)
PTSG_02477Nle1 protein. (504 aa)
PTSG_0318560S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (463 aa)
PTSG_03333Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (679 aa)
PTSG_03467Uncharacterized protein. (536 aa)
PTSG_0390566S pre-ribosomal particle constituent. (146 aa)
PTSG_04654Ribosomal protein L24E. (158 aa)
PTSG_05591Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (590 aa)
PTSG_05637Peptidase_M24 domain-containing protein. (372 aa)
PTSG_06701Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (718 aa)
PTSG_06665Proliferation-associated protein 2G4. (369 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (237 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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