(12 nodes) Syntaxin binding network (Salpingoeca rosetta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTSG_13168	Uncharacterized protein. (855 aa)
	PTSG_00606	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (605 aa)
	PTSG_00877	V-SNARE coiled-coil homology domain-containing protein. (96 aa)
	PTSG_04352	V-SNARE coiled-coil homology domain-containing protein. (751 aa)
	PTSG_04972	Uncharacterized protein. (1081 aa)
	PTSG_04797	TPR_REGION domain-containing protein. (292 aa)
	PTSG_04817	Uncharacterized protein. (401 aa)
	PTSG_06126	Uncharacterized protein. (424 aa)
	PTSG_06188	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (649 aa)
	PTSG_06276	Uncharacterized protein. (754 aa)
	PTSG_09674	Synaptosomal-associated protein. (552 aa)
	PTSG_11105	V-SNARE coiled-coil homology domain-containing protein. (145 aa)

Your Current Organism:

Salpingoeca rosetta

NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTSG_00606	PTSG_04797	F2TWY8	F2U9Q6	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	TPR_REGION domain-containing protein.	0.995
PTSG_00606	PTSG_06126	F2TWY8	F2UC09	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.724
PTSG_00606	PTSG_09674	F2TWY8	F2ULN7	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Synaptosomal-associated protein.	0.811
PTSG_00606	PTSG_11105	F2TWY8	F2US56	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	V-SNARE coiled-coil homology domain-containing protein.	0.598
PTSG_00877	PTSG_04797	F2TXR2	F2U9Q6	V-SNARE coiled-coil homology domain-containing protein.	TPR_REGION domain-containing protein.	0.993
PTSG_00877	PTSG_04972	F2TXR2	F2U956	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.548
PTSG_00877	PTSG_06126	F2TXR2	F2UC09	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.660
PTSG_00877	PTSG_06188	F2TXR2	F2UC73	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.	0.959
PTSG_00877	PTSG_06276	F2TXR2	F2UCG0	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.464
PTSG_00877	PTSG_09674	F2TXR2	F2ULN7	V-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein.	0.991
PTSG_00877	PTSG_11105	F2TXR2	F2US56	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.863
PTSG_04352	PTSG_04797	F2U8A8	F2U9Q6	V-SNARE coiled-coil homology domain-containing protein.	TPR_REGION domain-containing protein.	0.883
PTSG_04352	PTSG_04972	F2U8A8	F2U956	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.533
PTSG_04352	PTSG_06126	F2U8A8	F2UC09	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.638
PTSG_04352	PTSG_06188	F2U8A8	F2UC73	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.	0.864
PTSG_04352	PTSG_06276	F2U8A8	F2UCG0	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.464
PTSG_04352	PTSG_09674	F2U8A8	F2ULN7	V-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein.	0.897
PTSG_04797	PTSG_00606	F2U9Q6	F2TWY8	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.995
PTSG_04797	PTSG_00877	F2U9Q6	F2TXR2	TPR_REGION domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.993
PTSG_04797	PTSG_04352	F2U9Q6	F2U8A8	TPR_REGION domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.883

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