STRINGSTRING
PTSG_00442 PTSG_00442 PTSG_11229 PTSG_11229 PTSG_11173 PTSG_11173 PTSG_10947 PTSG_10947 PTSG_10056 PTSG_10056 PTSG_12939 PTSG_12939 PTSG_09428 PTSG_09428 PTSG_08962 PTSG_08962 PTSG_09662 PTSG_09662 PTSG_09623 PTSG_09623 PTSG_08535 PTSG_08535 PTSG_08455 PTSG_08455 PTSG_07479 PTSG_07479 PTSG_08120 PTSG_08120 PTSG_07735 PTSG_07735 PTSG_12612 PTSG_12612 PTSG_07573 PTSG_07573 PTSG_06502 PTSG_06502 PTSG_06673 PTSG_06673 PTSG_06614 PTSG_06614 PTSG_06939 PTSG_06939 PTSG_07151 PTSG_07151 PTSG_12364 PTSG_12364 PTSG_05311 PTSG_05311 PTSG_12209 PTSG_12209 PTSG_05001 PTSG_05001 PTSG_04979 PTSG_04979 PTSG_04424 PTSG_04424 PTSG_03738 PTSG_03738 PTSG_03489 PTSG_03489 PTSG_03482 PTSG_03482 PTSG_11986 PTSG_11986 PTSG_11980 PTSG_11980 PTSG_02809 PTSG_02809 PTSG_02757 PTSG_02757 PTSG_02587 PTSG_02587 PTSG_02193 PTSG_02193 PTSG_01239 PTSG_01239 PTSG_01147 PTSG_01147 PTSG_01926 PTSG_01926 PTSG_00904 PTSG_00904 PTSG_00674 PTSG_00674 PTSG_00612 PTSG_00612 PTSG_11600 PTSG_11600 PTSG_00400 PTSG_00400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00442Transcription activator. (1106 aa)
PTSG_11229Histone H2A; Belongs to the histone H2A family. (129 aa)
PTSG_11173TruB_N domain-containing protein. (257 aa)
PTSG_10947Replication protein A subunit. (601 aa)
PTSG_10056Histone H2B; Belongs to the histone H2B family. (130 aa)
PTSG_12939SANTA domain-containing protein. (1534 aa)
PTSG_09428Uncharacterized protein. (358 aa)
PTSG_08962Uncharacterized protein. (740 aa)
PTSG_09662Uncharacterized protein. (358 aa)
PTSG_09623Polymerase. (191 aa)
PTSG_08535ATP-dependent DNA helicase; Belongs to the helicase family. (1886 aa)
PTSG_08455Nucleoplasmin domain-containing protein. (351 aa)
PTSG_07479RecQ5. (1451 aa)
PTSG_08120Histone H2B; Belongs to the histone H2B family. (123 aa)
PTSG_07735ATP-dependent DNA helicase; Belongs to the helicase family. (582 aa)
PTSG_12612CCHC-type domain-containing protein. (901 aa)
PTSG_07573H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (207 aa)
PTSG_06502TM2 domain-containing protein. (82 aa)
PTSG_06673Uncharacterized protein. (364 aa)
PTSG_06614Replication factor C 4. (345 aa)
PTSG_06939Replication factor C subunit 5. (330 aa)
PTSG_07151Replication factor C subunit 3. (353 aa)
PTSG_12364Uncharacterized protein. (718 aa)
PTSG_05311SNF2 family DNA-dependent ATPase. (2192 aa)
PTSG_12209Uncharacterized protein. (342 aa)
PTSG_05001CS domain-containing protein. (618 aa)
PTSG_04979RuvB-like helicase; Belongs to the RuvB family. (455 aa)
PTSG_04424Replication factor C subunit 2. (324 aa)
PTSG_03738H/ACA ribonucleoprotein complex subunit 3. (64 aa)
PTSG_03489Centromere/microtubule-binding protein cbf5. (495 aa)
PTSG_03482ATP-dependent DNA helicase; Belongs to the helicase family. (1165 aa)
PTSG_11986AAA domain-containing protein. (1028 aa)
PTSG_11980Uncharacterized protein. (506 aa)
PTSG_02809Uncharacterized protein. (1571 aa)
PTSG_02757Uncharacterized protein. (1731 aa)
PTSG_02587Telo_bind domain-containing protein. (743 aa)
PTSG_02193Mis18 domain-containing protein. (220 aa)
PTSG_01239Uncharacterized protein. (1902 aa)
PTSG_01147RuvB-like helicase; Belongs to the RuvB family. (513 aa)
PTSG_01926Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (168 aa)
PTSG_00904HTH myb-type domain-containing protein. (939 aa)
PTSG_00674Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PTSG_00612Serine/threonine-protein phosphatase 4 catalytic subunit. (183 aa)
PTSG_11600Uncharacterized protein. (603 aa)
PTSG_00400Cyclin A; Belongs to the cyclin family. (568 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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