STRINGSTRING
PTSG_00828 PTSG_00828 PTSG_11704 PTSG_11704 PTSG_12134 PTSG_12134 PTSG_03984 PTSG_03984 PTSG_04025 PTSG_04025 PTSG_04467 PTSG_04467 PTSG_05027 PTSG_05027 PTSG_05484 PTSG_05484 PTSG_12432 PTSG_12432 PTSG_06334 PTSG_06334 PTSG_05914 PTSG_05914 PTSG_07135 PTSG_07135 PTSG_12477 PTSG_12477 PTSG_09569 PTSG_09569 PTSG_11014 PTSG_11014
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00828HEM4 domain-containing protein. (284 aa)
PTSG_11704Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (543 aa)
PTSG_12134Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. (400 aa)
PTSG_03984Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (202 aa)
PTSG_04025Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (251 aa)
PTSG_04467Coproporphyrinogen III oxidase. (396 aa)
PTSG_05027Uncharacterized protein. (142 aa)
PTSG_05484Bifunctional aminoacyl-tRNA synthetase. (1489 aa)
PTSG_12432Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (737 aa)
PTSG_06334Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (697 aa)
PTSG_05914Uncharacterized protein. (511 aa)
PTSG_07135Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (247 aa)
PTSG_12477Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (252 aa)
PTSG_09569Uncharacterized protein. (440 aa)
PTSG_11014Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (272 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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