STRINGSTRING
CSTF3 CSTF3 SLBP SLBP LSM10 LSM10 NCBP1 NCBP1 CLP1 CLP1 ENSPANP00000006774 ENSPANP00000006774 CPSF7 CPSF7 BCL2L2-PABPN1 BCL2L2-PABPN1 CPSF4L CPSF4L CPSF2 CPSF2 CPSF3 CPSF3 WDR33 WDR33 CPSF6 CPSF6 CSTF2 CSTF2 CSTF1 CSTF1 ENSPANP00000043082 ENSPANP00000043082 ENSPANP00000042764 ENSPANP00000042764 LSM11 LSM11 ENSPANP00000035950 ENSPANP00000035950 ENSPANP00000035299 ENSPANP00000035299 ENSPANP00000034859 ENSPANP00000034859 SYMPK SYMPK SNRPG SNRPG PAPOLA PAPOLA ENSPANP00000030795 ENSPANP00000030795 ENSPANP00000027975 ENSPANP00000027975 ENSPANP00000027765 ENSPANP00000027765 SNRPB SNRPB SNRPE SNRPE ZNF473 ZNF473 ENSPANP00000024006 ENSPANP00000024006 ENSPANP00000022702 ENSPANP00000022702 NCBP2 NCBP2 SNRPD3 SNRPD3 CPSF4 CPSF4 CPSF1 CPSF1 PCF11 PCF11 FIP1L1 FIP1L1 NUDT21 NUDT21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSTF3Cleavage stimulation factor subunit 3. (717 aa)
SLBPStem-loop binding protein. (279 aa)
LSM10LSM10, U7 small nuclear RNA associated. (123 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (436 aa)
ENSPANP00000006774Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (81 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (511 aa)
BCL2L2-PABPN1BCL2L2-PABPN1 readthrough. (333 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (179 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (684 aa)
WDR33WD repeat domain 33. (1336 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
CSTF2Cleavage stimulation factor subunit 2. (626 aa)
CSTF1Cleavage stimulation factor subunit 1. (482 aa)
ENSPANP00000043082Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
ENSPANP00000042764Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (85 aa)
LSM11LSM11, U7 small nuclear RNA associated. (366 aa)
ENSPANP00000035950RRM domain-containing protein. (295 aa)
ENSPANP00000035299Sm domain-containing protein. (127 aa)
ENSPANP00000034859Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (91 aa)
SYMPKSymplekin. (1304 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (96 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
ENSPANP00000030795Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (70 aa)
ENSPANP00000027975Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (75 aa)
ENSPANP00000027765Uncharacterized protein. (54 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (261 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ZNF473Zinc finger protein 473. (876 aa)
ENSPANP00000024006Sm domain-containing protein. (65 aa)
ENSPANP00000022702RRM domain-containing protein. (293 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (89 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1394 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1686 aa)
FIP1L1Fip1 domain-containing protein. (603 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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