(15 nodes) mRNA splice site selection, and Primary miRNA binding network (Gorilla gorilla)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SRSF10	Serine and arginine rich splicing factor 10. (262 aa)
	SRSF4	Serine and arginine rich splicing factor 4. (494 aa)
	SRSF1	Uncharacterized protein. (253 aa)
	TRA2A	Transformer 2 alpha homolog. (282 aa)
	SRSF6	Serine and arginine rich splicing factor 6. (344 aa)
	TRA2B	Transformer 2 beta homolog. (288 aa)
	SRPK1	SRSF protein kinase 1. (655 aa)
	SRSF7	Serine and arginine rich splicing factor 7. (238 aa)
	SRSF5	Serine and arginine rich splicing factor 5. (272 aa)
	G3RLW0_GORGO	RRM domain-containing protein. (164 aa)
	G3S726_GORGO	Serine and arginine rich splicing factor 2. (205 aa)
	G3SGY1_GORGO	RRM domain-containing protein. (210 aa)
	ENSGGOP00000030345	RRM domain-containing protein. (102 aa)
	ENSGGOP00000035549	annotation not available (164 aa)
	ENSGGOP00000048053	RRM domain-containing protein. (183 aa)

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000030345	ENSGGOP00000035549	ENSGGOP00000030345	ENSGGOP00000035549	RRM domain-containing protein.	annotation not available	0.761
ENSGGOP00000030345	ENSGGOP00000048053	ENSGGOP00000030345	ENSGGOP00000048053	RRM domain-containing protein.	RRM domain-containing protein.	0.788
ENSGGOP00000030345	G3RLW0_GORGO	ENSGGOP00000030345	ENSGGOP00000016772	RRM domain-containing protein.	RRM domain-containing protein.	0.761
ENSGGOP00000030345	G3S726_GORGO	ENSGGOP00000030345	ENSGGOP00000023883	RRM domain-containing protein.	Serine and arginine rich splicing factor 2.	0.878
ENSGGOP00000030345	SRPK1	ENSGGOP00000030345	ENSGGOP00000013238	RRM domain-containing protein.	SRSF protein kinase 1.	0.576
ENSGGOP00000030345	SRSF1	ENSGGOP00000030345	ENSGGOP00000004299	RRM domain-containing protein.	Uncharacterized protein.	0.917
ENSGGOP00000030345	SRSF10	ENSGGOP00000030345	ENSGGOP00000000387	RRM domain-containing protein.	Serine and arginine rich splicing factor 10.	0.635
ENSGGOP00000030345	SRSF4	ENSGGOP00000030345	ENSGGOP00000002404	RRM domain-containing protein.	Serine and arginine rich splicing factor 4.	0.727
ENSGGOP00000030345	SRSF5	ENSGGOP00000030345	ENSGGOP00000016062	RRM domain-containing protein.	Serine and arginine rich splicing factor 5.	0.718
ENSGGOP00000030345	SRSF6	ENSGGOP00000030345	ENSGGOP00000009578	RRM domain-containing protein.	Serine and arginine rich splicing factor 6.	0.788
ENSGGOP00000030345	SRSF7	ENSGGOP00000030345	ENSGGOP00000014261	RRM domain-containing protein.	Serine and arginine rich splicing factor 7.	0.917
ENSGGOP00000030345	TRA2A	ENSGGOP00000030345	ENSGGOP00000008853	RRM domain-containing protein.	Transformer 2 alpha homolog.	0.686
ENSGGOP00000030345	TRA2B	ENSGGOP00000030345	ENSGGOP00000009620	RRM domain-containing protein.	Transformer 2 beta homolog.	0.924
ENSGGOP00000035549	ENSGGOP00000030345	ENSGGOP00000035549	ENSGGOP00000030345	annotation not available	RRM domain-containing protein.	0.761
ENSGGOP00000035549	ENSGGOP00000048053	ENSGGOP00000035549	ENSGGOP00000048053	annotation not available	RRM domain-containing protein.	0.841
ENSGGOP00000035549	G3S726_GORGO	ENSGGOP00000035549	ENSGGOP00000023883	annotation not available	Serine and arginine rich splicing factor 2.	0.966
ENSGGOP00000035549	G3SGY1_GORGO	ENSGGOP00000035549	ENSGGOP00000027368	annotation not available	RRM domain-containing protein.	0.828
ENSGGOP00000035549	SRPK1	ENSGGOP00000035549	ENSGGOP00000013238	annotation not available	SRSF protein kinase 1.	0.422
ENSGGOP00000035549	SRSF1	ENSGGOP00000035549	ENSGGOP00000004299	annotation not available	Uncharacterized protein.	0.937
ENSGGOP00000035549	SRSF10	ENSGGOP00000035549	ENSGGOP00000000387	annotation not available	Serine and arginine rich splicing factor 10.	0.632