STRINGSTRING
CYP27B1 CYP27B1 PTCH2 PTCH2 PRKCH PRKCH CYP27C1 CYP27C1 MACROH2A1 MACROH2A1 NCOA3 NCOA3 KDF1 KDF1 NOTCH1 NOTCH1 SFRP4 SFRP4 VDR VDR TRIM16 TRIM16 ZBED2 ZBED2 ATOH1 ATOH1 MACROH2A2 MACROH2A2 MED1 MED1 PTCH1 PTCH1 BMP4 BMP4 ALOX15B ALOX15B ENSFCAP00000052961 ENSFCAP00000052961 ETV4 ETV4 NUMA1 NUMA1 SFN SFN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CYP27B1Cytochrome P450 family 27 subfamily B member 1; Belongs to the cytochrome P450 family. (508 aa)
PTCH2Patched 2. (1207 aa)
PRKCHProtein kinase C eta type; Calcium-independent, phospholipid- and diacylglycerol (DAG)- dependent serine/threonine-protein kinase that is involved in the regulation of cell differentiation in keratinocytes and pre-B cell receptor, mediates regulation of epithelial tight junction integrity and foam cell formation, and is required for glioblastoma proliferation and apoptosis prevention in MCF-7 cells. In keratinocytes, binds and activates the tyrosine kinase FYN, which in turn blocks epidermal growth factor receptor (EGFR) signaling and leads to keratinocyte growth arrest and differentia [...] (683 aa)
CYP27C1Cytochrome P450 family 27 subfamily C member 1; Belongs to the cytochrome P450 family. (580 aa)
MACROH2A1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
NCOA3Nuclear receptor coactivator. (1412 aa)
KDF1Keratinocyte differentiation factor 1. (397 aa)
NOTCH1Notch receptor 1. (2543 aa)
SFRP4Secreted frizzled related protein 4. (346 aa)
VDRVitamin D receptor. (441 aa)
TRIM16Uncharacterized protein. (528 aa)
ZBED2Zinc finger BED-type containing 2. (218 aa)
ATOH1Atonal bHLH transcription factor 1. (356 aa)
MACROH2A2Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1583 aa)
PTCH1Patched 1. (1451 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
ALOX15BArachidonate 15-lipoxygenase type B. (678 aa)
ENSFCAP00000052961LRAT domain-containing protein. (162 aa)
ETV4ETS variant 4. (488 aa)
NUMA1Nuclear mitotic apparatus protein 1. (2135 aa)
SFNStratifin; Belongs to the 14-3-3 family. (252 aa)
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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