STRINGSTRING
MMP9 MMP9 NOTCH1 NOTCH1 HES5 HES5 CCND1 CCND1 TP63 TP63 SPRY1 SPRY1 SPRED1 SPRED1 SPRY2 SPRY2 GRHL2 GRHL2 CTNNB1 CTNNB1 ACVRL1 ACVRL1 FOXE3 FOXE3 JAG1 JAG1 SIX2 SIX2 XDH XDH S1PR3 S1PR3 TBX3 TBX3 VHL VHL SMO SMO FGF10 FGF10 FST FST SOX9 SOX9 KRAS KRAS HOXA7 HOXA7 DLL1 DLL1 ZEB1 ZEB1 CAV1 CAV1 STAT1 STAT1 YAP1 YAP1 OSR1 OSR1 FRZB FRZB NKX6-3 NKX6-3 HES1 HES1 FOXJ2 FOXJ2 NODAL NODAL EZH2 EZH2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MMP9Matrix metalloproteinase-9. (708 aa)
NOTCH1Neurogenic locus notch homolog protein 1 preproprotein. (2560 aa)
HES5Hes family bHLH transcription factor 5. (226 aa)
CCND1Cyclin D1; Belongs to the cyclin family. (295 aa)
TP63Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. (680 aa)
SPRY1Sprouty RTK signaling antagonist 1. (319 aa)
SPRED1Sprouty related EVH1 domain containing 1. (445 aa)
SPRY2Sprouty RTK signaling antagonist 2. (315 aa)
GRHL2Grainyhead like transcription factor 2. (626 aa)
CTNNB1Catenin beta 1. (808 aa)
ACVRL1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
FOXE3Forkhead box E3. (325 aa)
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1211 aa)
SIX2SIX homeobox 2. (296 aa)
XDHXanthine dehydrogenase/oxidase. (1336 aa)
S1PR3Sphingosine-1-phosphate receptor 3; Belongs to the G-protein coupled receptor 1 family. (377 aa)
TBX3T-box transcription factor TBX3 isoform 2. (745 aa)
VHLVon Hippel-Lindau disease tumor suppressor isoform 1. (205 aa)
SMOSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (783 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (211 aa)
FSTFollistatin; Binds directly to activin and functions as an activin antagonist. Specific inhibitor of the biosynthesis and secretion of pituitary follicle stimulating hormone (FSH). (343 aa)
SOX9Transcription factor SOX-9; Transcriptional regulator that plays a role in chondrocytes differentiation and skeletal development. Binds to the COL2A1 promoter and activates COL2A1 expression, as part of a complex with ZNF219. (511 aa)
KRASKRAS proto-oncogene, GTPase. (189 aa)
HOXA7Homeobox A7. (234 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (729 aa)
ZEB1Zinc finger E-box binding homeobox 1. (1128 aa)
CAV1Caveolin-1; May act as a scaffolding protein within caveolar membranes. Forms a stable heterooligomeric complex with CAV2 that targets to lipid rafts and drives caveolae formation. Mediates the recruitment of CAVIN proteins (CAVIN1/2/3/4) to the caveolae (By similarity). Interacts directly with G-protein alpha subunits and can functionally regulate their activity (By similarity). Involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Its binding to DPP4 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependen [...] (177 aa)
STAT1Signal transducer and activator of transcription 1; Signal transducer and transcription activator that mediates cellular responses to interferons (IFNs), cytokine KITLG/SCF and other cytokines and other growth factors. Following type I IFN (IFN-alpha and IFN-beta) binding to cell surface receptors, signaling via protein kinases leads to activation of Jak kinases (TYK2 and JAK1) and to tyrosine phosphorylation of STAT1 and STAT2. The phosphorylated STATs dimerize and associate with ISGF3G/IRF-9 to form a complex termed ISGF3 transcription factor, that enters the nucleus. ISGF3 binds to [...] (856 aa)
YAP1Yes associated protein 1. (432 aa)
OSR1Odd-skipped related transcription factor 1. (267 aa)
FRZBSecreted frizzled-related protein 3. (325 aa)
NKX6-3Homeobox protein Nkx-6.3 isoform X1. (261 aa)
HES1Uncharacterized protein. (280 aa)
FOXJ2Forkhead box J2. (574 aa)
NODALNodal growth differentiation factor. (316 aa)
EZH2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (762 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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