STRINGSTRING
NUP37 NUP37 NUP42 NUP42 NUP153 NUP153 AAAS AAAS NUP35 NUP35 NDC1 NDC1 NPAP1 NPAP1 SEC13 SEC13 NUP58 NUP58 SNRPF SNRPF SNRPD1 SNRPD1 DDX20 DDX20 WDR77 WDR77 NUP54 NUP54 SNRPD3 SNRPD3 NUP210 NUP210 GEMIN8 GEMIN8 NUP160 NUP160 NUP98 NUP98 F1SRM6_PIG F1SRM6_PIG SMN1 SMN1 NUP85 NUP85 NUP205 NUP205 TGS1 TGS1 RANBP2 RANBP2 SNRPG SNRPG RAE1 RAE1 TPR TPR SNUPN SNUPN NUP88 NUP88 NUP214 NUP214 GEMIN5 GEMIN5 NUP155 NUP155 PRMT5 PRMT5 NUP93 NUP93 POM121C POM121C NUP133 NUP133 SNRPB SNRPB NUP62 NUP62 GEMIN6 GEMIN6 GEMIN4 GEMIN4 NUP43 NUP43 GEMIN7 GEMIN7 NUP188 NUP188 CLNS1A CLNS1A GEMIN2 GEMIN2 NUP107 NUP107
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP37Nucleoporin Nup37. (333 aa)
NUP42Nucleoporin-like protein 2. (418 aa)
NUP153Nucleoporin 153. (1473 aa)
AAASAladin WD repeat nucleoporin. (554 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
NDC1NDC1 transmembrane nucleoporin. (757 aa)
NPAP1Uncharacterized protein. (1181 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (341 aa)
NUP58Nucleoporin 58. (583 aa)
SNRPFSm domain-containing protein. (86 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
DDX20Putative ATP-dependent RNA helicase DDX20 isoform X1. (832 aa)
WDR77WD repeat domain 77. (342 aa)
NUP54Nucleoporin 54. (564 aa)
SNRPD3Sm domain-containing protein. (281 aa)
NUP210Nucleoporin 210. (1946 aa)
GEMIN8Gem nuclear organelle associated protein 8. (239 aa)
NUP160Nucleoporin 160. (1437 aa)
NUP98Nucleoporin 98. (1753 aa)
F1SRM6_PIGUncharacterized protein. (954 aa)
SMN1Tudor domain-containing protein. (381 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (684 aa)
NUP205Nucleoporin 205. (2026 aa)
TGS1Trimethylguanosine synthase 1. (779 aa)
RANBP2RAN binding protein 2. (3233 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
RAE1mRNA export factor; Plays a role in mitotic bipolar spindle formation. Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton. (368 aa)
TPRTranslocated promoter region, nuclear basket protein. (2518 aa)
SNUPNSnurportin 1. (386 aa)
NUP88Nucleoporin 88. (739 aa)
NUP214Nucleoporin 214. (2016 aa)
GEMIN5Gem nuclear organelle associated protein 5. (1511 aa)
NUP155Nucleoporin 155. (1391 aa)
PRMT5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (670 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (797 aa)
POM121CUncharacterized protein. (1193 aa)
NUP133Nucleoporin 133. (1160 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (231 aa)
NUP62Nucleoporin 62. (478 aa)
GEMIN6Gem nuclear organelle associated protein 6. (171 aa)
GEMIN4Gem nuclear organelle associated protein 4. (1059 aa)
NUP43Nucleoporin Nup43 isoform X2. (380 aa)
GEMIN7Gem nuclear organelle associated protein 7. (131 aa)
NUP188Nucleoporin 188. (1769 aa)
CLNS1AChloride nucleotide-sensitive channel 1A. (236 aa)
GEMIN2Gem nuclear organelle associated protein 2. (372 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (925 aa)
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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