STRINGSTRING
SGRA_2056 SGRA_2056 SGRA_2057 SGRA_2057 secD secD ftnA ftnA SGRA_2179 SGRA_2179 SGRA_2186 SGRA_2186 SGRA_2259 SGRA_2259 SGRA_2262 SGRA_2262 SGRA_2279 SGRA_2279 secE secE rpoB rpoB rpoC rpoC SGRA_2394 SGRA_2394 SGRA_2466 SGRA_2466 SGRA_2515 SGRA_2515 SGRA_2516 SGRA_2516 SGRA_2546 SGRA_2546 SGRA_2554 SGRA_2554 sucB sucB ahpC ahpC SGRA_2719 SGRA_2719 SGRA_2747 SGRA_2747 SGRA_2757 SGRA_2757 pstS pstS lrp lrp trxB-2 trxB-2 SGRA_2945 SGRA_2945 aceF aceF SGRA_3095 SGRA_3095 trxA-2 trxA-2 SGRA_0061 SGRA_0061 SGRA_0222 SGRA_0222 sodA sodA trxA trxA sodA-2 sodA-2 SGRA_0516 SGRA_0516 SGRA_0527 SGRA_0527 SGRA_0559 SGRA_0559 SGRA_0607 SGRA_0607 SGRA_0809 SGRA_0809 SGRA_0825 SGRA_0825 SGRA_1076 SGRA_1076 SGRA_1096 SGRA_1096 SGRA_1306 SGRA_1306 SGRA_1437 SGRA_1437 SGRA_1465 SGRA_1465 trxB trxB SGRA_1591 SGRA_1591 SGRA_1694 SGRA_1694 SGRA_1711 SGRA_1711 SGRA_1742 SGRA_1742 SGRA_1770 SGRA_1770 rpoA rpoA secY secY secA secA SGRA_3561 SGRA_3561 sucB-2 sucB-2 ndk ndk SGRA_3722 SGRA_3722 SGRA_3799 SGRA_3799 ahpC-2 ahpC-2 SGRA_3856 SGRA_3856 SGRA_3958 SGRA_3958 SGRA_4153 SGRA_4153 asnC asnC ahpC-3 ahpC-3 SGRA_3166 SGRA_3166 SGRA_3185 SGRA_3185 msrA msrA SGRA_3397 SGRA_3397 SGRA_3483 SGRA_3483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SGRA_2056Mammalian cell entry related domain protein. (322 aa)
SGRA_2057Mammalian cell entry related domain protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (355 aa)
secDBifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (1058 aa)
ftnAFerritin 1; Iron-storage protein. (172 aa)
SGRA_2179MotA/TolQ/ExbB proton channel. (492 aa)
SGRA_2186Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (141 aa)
SGRA_2259MHC_I C-terminus family protein; COG0666 FOG: Ankyrin repeat. (455 aa)
SGRA_2262Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (203 aa)
SGRA_2279COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (150 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (64 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1276 aa)
rpoCDNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1420 aa)
SGRA_2394Bacterioferritin comigratory protein; COG1225 Peroxiredoxin. (157 aa)
SGRA_2466Sugar transport protein; COG2814 Arabinose efflux permease. (406 aa)
SGRA_2515Thioredoxin family protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (180 aa)
SGRA_2516COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (699 aa)
SGRA_2546DNA-directed RNA polymerase, omega subunit. (113 aa)
SGRA_2554Membrane protein. (328 aa)
sucB2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (420 aa)
ahpCCOG0450 Peroxiredoxin. (183 aa)
SGRA_2719Hypothetical protein. (357 aa)
SGRA_2747Serine/threonine protein kinase. (482 aa)
SGRA_2757Thioredoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (93 aa)
pstSOmpA family protein; COG0226 ABC-type phosphate transport system, periplasmic component. (313 aa)
lrpTranscriptional regulator, AsnC family protein; COG1522 Transcriptional regulators. (165 aa)
trxB-2COG0492 Thioredoxin reductase. (313 aa)
SGRA_2945Hypothetical protein. (967 aa)
aceFPyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (417 aa)
SGRA_3095Riboflavin biosynthesis protein ribd; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (348 aa)
trxA-2Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family. (106 aa)
SGRA_0061Membrane protein. (328 aa)
SGRA_0222Thioredoxin family protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (457 aa)
sodAManganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (256 aa)
trxAThioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. (98 aa)
sodA-2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (203 aa)
SGRA_0516Alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen; COG0526 Thiol-disulfide isomerase and thioredoxins. (235 aa)
SGRA_0527Hypothetical protein. (335 aa)
SGRA_0559COG0526 Thiol-disulfide isomerase and thioredoxins. (495 aa)
SGRA_0607Alkyl hydroperoxide reductase; COG0526 Thiol-disulfide isomerase and thioredoxins. (186 aa)
SGRA_0809Alkyl hydroperoxide reductase, F52a subunit; COG0492 Thioredoxin reductase. (301 aa)
SGRA_0825Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (74 aa)
SGRA_1076Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (600 aa)
SGRA_1096Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. (185 aa)
SGRA_1306Hypothetical protein. (247 aa)
SGRA_1437Alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen; COG0526 Thiol-disulfide isomerase and thioredoxins. (415 aa)
SGRA_1465Arsenate reductase; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (196 aa)
trxBCOG0492 Thioredoxin reductase. (339 aa)
SGRA_1591Hypothetical protein. (331 aa)
SGRA_1694COG0477 Permeases of the major facilitator superfamily. (422 aa)
SGRA_1711Membrane protein. (329 aa)
SGRA_1742ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (605 aa)
SGRA_1770General stress protein; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful). (130 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (332 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (471 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (1110 aa)
SGRA_3561Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (217 aa)
sucB-2Catalytic domain of components of various dehydrogenase complexes; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes. (441 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (139 aa)
SGRA_3722ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (597 aa)
SGRA_3799COG0477 Permeases of the major facilitator superfamily. (405 aa)
ahpC-2Antioxidant, AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (219 aa)
SGRA_3856Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (205 aa)
SGRA_3958Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (152 aa)
SGRA_4153Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG0526 Thiol-disulfide isomerase and thioredoxins. (180 aa)
asnCTranscriptional regulator, AsnC family protein; COG1522 Transcriptional regulators. (160 aa)
ahpC-3Antioxidant, AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (221 aa)
SGRA_3166Fibronectin type III domain protein; COG3291 FOG: PKD repeat. (1619 aa)
SGRA_3185ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (600 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (182 aa)
SGRA_3397ABC transporter related protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (597 aa)
SGRA_3483Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (208 aa)
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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