STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsp1Lymphocyte-specific protein 1 isoform X1. (82 aa)    
Predicted Functional Partners:
Ksr1
Kinase suppressor of Ras 1 isoform X2.
    
 0.944
LOC105998778
CD209 antigen-like protein E isoform X1.
    
 0.918
Mapkapk2
MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.
    
 0.901
Ikbke
Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.
     
 0.862
Cyld
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1; Belongs to the peptidase C19 family.
     
 0.862
Ksr2
Kinase suppressor of Ras 2.
    
 0.861
Clec7a
C-type lectin domain family 7 member A.
    
  0.859
Arhgef12
Rho guanine nucleotide exchange factor 12.
     
 0.851
Cald1
Caldesmon isoform X1.
    
  0.849
Plk3
Serine/threonine-protein kinase PLK.
     
 0.814
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.