STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syt2Synaptotagmin-2. (423 aa)    
Predicted Functional Partners:
Snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.986
Ston2
Stonin-2; Belongs to the Stoned B family.
   
 0.948
Vamp2
Vesicle-associated membrane protein 2 isoform X2.
   
 0.946
Vamp1
Vesicle-associated membrane protein 1 isoform X1.
   
 0.934
Vamp3
Vesicle-associated membrane protein 3.
    
 0.926
Cplx1
Complexin-1.
   
 0.898
Stx1b
syntaxin-1B; Belongs to the syntaxin family.
   
 0.873
Stx1a
syntaxin-1A; Belongs to the syntaxin family.
   
 0.865
Syt4
Synaptotagmin-4.
   
0.856
Syt11
Synaptotagmin-11.
   
0.855
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.