Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCO1631 | SCO1632 | gene:17759224 | gene:17759225 | SCI41.14c, possible helicase, len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase, 612 aa; fasta scores: opt: 2382 z-score: 2658.3 E(): 0; 68.9% identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues, max score: 1.477, probability 0.92). | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.800 |
| SCO1631 | SCO1633 | gene:17759224 | gene:17759226 | SCI41.14c, possible helicase, len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase, 612 aa; fasta scores: opt: 2382 z-score: 2658.3 E(): 0; 68.9% identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues, max score: 1.477, probability 0.92). | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.760 |
| SCO1631 | SCO1636 | gene:17759224 | gene:17759229 | SCI41.14c, possible helicase, len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase, 612 aa; fasta scores: opt: 2382 z-score: 2658.3 E(): 0; 68.9% identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues, max score: 1.477, probability 0.92). | SCI41.19c, unknown, len: 360 aa. Similar to various hypothetical proteins, e.g. TR:P72265 (EMBL:Z82004) Rhodococcus erythropolis ORF11, 326 aa; fasta scores: opt: 694 z-score: 768.9 E(): 0; 39.8% identity in 322 aa overlap. | 0.721 |
| SCO1631 | SCO1637 | gene:17759224 | gene:17759230 | SCI41.14c, possible helicase, len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase, 612 aa; fasta scores: opt: 2382 z-score: 2658.3 E(): 0; 68.9% identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues, max score: 1.477, probability 0.92). | SCI41.20c, unknown, len: 317 aa. Similar to various hypothetical proteins, e.g. TR:P72264 (EMBL:Z82004) Rhodococcus erythropolis ORF10, 330 aa; fasta scores: opt: 578 z-score: 682.7 E(): 1.2e-30; 39.5% identity in 332 aa overlap. | 0.726 |
| SCO1632 | SCO1631 | gene:17759225 | gene:17759224 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | SCI41.14c, possible helicase, len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase, 612 aa; fasta scores: opt: 2382 z-score: 2658.3 E(): 0; 68.9% identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues, max score: 1.477, probability 0.92). | 0.800 |
| SCO1632 | SCO1633 | gene:17759225 | gene:17759226 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.999 |
| SCO1632 | SCO1636 | gene:17759225 | gene:17759229 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | SCI41.19c, unknown, len: 360 aa. Similar to various hypothetical proteins, e.g. TR:P72265 (EMBL:Z82004) Rhodococcus erythropolis ORF11, 326 aa; fasta scores: opt: 694 z-score: 768.9 E(): 0; 39.8% identity in 322 aa overlap. | 0.699 |
| SCO1632 | SCO1637 | gene:17759225 | gene:17759230 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | SCI41.20c, unknown, len: 317 aa. Similar to various hypothetical proteins, e.g. TR:P72264 (EMBL:Z82004) Rhodococcus erythropolis ORF10, 330 aa; fasta scores: opt: 578 z-score: 682.7 E(): 1.2e-30; 39.5% identity in 332 aa overlap. | 0.693 |
| SCO1632 | SCO3005 | gene:17759225 | gene:17760617 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Preprotein translocase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.910 |
| SCO1632 | SCO3768 | gene:17759225 | gene:17761392 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | SCH63.15, possible translocase protein, len: 82 aa; similar to SW:YK94_MYCTU (EMBL:Z73966) Mycobacterium tuberculosis hypothetical 8.9 kDa protein MTCY49.34c, 83 aa; fasta scores: opt: 123 z-score: 165.1 E(): 0.11; 40.6% identity in 69 aa overlap. Contains Pfam match to entry PF02416 MttA_Hcf106. | 0.968 |
| SCO1632 | SCO4722 | gene:17759225 | gene:17762371 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.877 |
| SCO1632 | SCO5150 | gene:17759225 | gene:17762799 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Putative membrane protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.999 |
| SCO1632 | SCO5580 | gene:17759225 | gene:17763238 | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Putative prokaryotic docking protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.812 |
| SCO1633 | SCO1631 | gene:17759226 | gene:17759224 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCI41.14c, possible helicase, len: 950 aa. Similar to TR:O69801 (EMBL:AJ223310) Streptomyces avermitilis SAB3 helicase, 612 aa; fasta scores: opt: 2382 z-score: 2658.3 E(): 0; 68.9% identity in 602 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase and PS00017 ATP/GTP-binding site motif A (P-loop). Contains probable coiled-coil from 554 to 586 (33 residues, max score: 1.477, probability 0.92). | 0.760 |
| SCO1633 | SCO1632 | gene:17759226 | gene:17759225 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Putative integral membrane protein SCI41.15c; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.999 |
| SCO1633 | SCO1636 | gene:17759226 | gene:17759229 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCI41.19c, unknown, len: 360 aa. Similar to various hypothetical proteins, e.g. TR:P72265 (EMBL:Z82004) Rhodococcus erythropolis ORF11, 326 aa; fasta scores: opt: 694 z-score: 768.9 E(): 0; 39.8% identity in 322 aa overlap. | 0.746 |
| SCO1633 | SCO1637 | gene:17759226 | gene:17759230 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCI41.20c, unknown, len: 317 aa. Similar to various hypothetical proteins, e.g. TR:P72264 (EMBL:Z82004) Rhodococcus erythropolis ORF10, 330 aa; fasta scores: opt: 578 z-score: 682.7 E(): 1.2e-30; 39.5% identity in 332 aa overlap. | 0.740 |
| SCO1633 | SCO3005 | gene:17759226 | gene:17760617 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Preprotein translocase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.899 |
| SCO1633 | SCO3768 | gene:17759226 | gene:17761392 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCH63.15, possible translocase protein, len: 82 aa; similar to SW:YK94_MYCTU (EMBL:Z73966) Mycobacterium tuberculosis hypothetical 8.9 kDa protein MTCY49.34c, 83 aa; fasta scores: opt: 123 z-score: 165.1 E(): 0.11; 40.6% identity in 69 aa overlap. Contains Pfam match to entry PF02416 MttA_Hcf106. | 0.900 |
| SCO1633 | SCO4722 | gene:17759226 | gene:17762371 | Putative secreted protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Preprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.903 |
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