Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCO0761 | SCO1675 | gene:17758344 | gene:17759268 | Hypothetical protein SCF81.20; SCF81.20, unknown, len: 59 aa. | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | 0.483 |
| SCO1674 | SCO1675 | gene:17759267 | gene:17759268 | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | 0.761 |
| SCO1674 | SCO1676 | gene:17759267 | gene:17759269 | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | SCI52.18c, possible peptidase, len: 445 aa; similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288, 467 aa; fasta scores: opt: 1595 Z-score: 1853.9 bits: 352.3 E(): 1.1e-95; 54.788% identity in 449 aa overlap, to SW:ACY1_PIG (EMBL:D13514) Sus scrofa aminoacylase-1 (EC 3.5.1.14) Acy1, 406 aa; fasta scores: opt: 368 Z-score: 430.7 bits: 88.7 E(): 2.1e-16; 27.563% identity in 439 aa overlap and to TR:Q9ZBI7 (EMBL:AL035161) Streptomyces coelicolor putative aminoacylase SC9C7.23, 444 aa; fasta scores: opt: 1543 Z-score: 1530.3 bits: 292.3 E(): 1.6e-79; 54.795% i [...] | 0.685 |
| SCO1674 | SCO2718 | gene:17759267 | gene:17760325 | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | Putative secreted protein; Probably forms part of the rodlet layer on the spore surface; despite their high similarity both RdlA and RdlB are required for rodlet formation. Plays a role in cell adhesion to polystyrene plates. Does not form amyloid fibrils in vitro, unlike RdlB. Belongs to the rodlin family. | 0.731 |
| SCO1674 | SCO2719 | gene:17759267 | gene:17760326 | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | Putative secreted protein; Forms part of the rodlet layer on the spore surface; despite their high similarity both RdlA and RdlB are required for rodlet formation. Plays a role in cell adhesion to polystyrene plates. Forms amyloid-like fibrils in vitro composed of stacked beta-sheets. Belongs to the rodlin family. | 0.670 |
| SCO1674 | SCO6682 | gene:17759267 | gene:17764340 | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | Hypothetical protein SC5A7.32; [Lanthionine-containing peptide SapB precursor RamS]: Stably accumulated precursor of SapB. Belongs to the lanthionine-containing morphogen family. | 0.416 |
| SCO1674 | SCO7637 | gene:17759267 | gene:17765297 | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | SC10F4.10c, secreted endoglucanase, len: 486 aa; highly similar to SW:GUNA_STRLI (EMBL:M82807) Streptomyces lividans endoglucanase CelA precursor (EC 3.2.1.4) CelA, 459 aa; fasta scores: opt: 2977 z-score: 3136.1 E(): 0; 97.4% identity in 461 aa overlap. Contains Pfam matches to entries PF00553 CBD_2, Cellulose binding domain and PF00150 cellulase, Cellulase (glycosyl hydrolase family 5) and matches to Prosite entries PS00561 Cellulose-binding domain, bacterial type and PS00659 Glycosyl hydrolases family 5 signature. Also contains possible N-terminal region signal peptide sequence. | 0.689 |
| SCO1675 | SCO0761 | gene:17759268 | gene:17758344 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | Hypothetical protein SCF81.20; SCF81.20, unknown, len: 59 aa. | 0.483 |
| SCO1675 | SCO1674 | gene:17759268 | gene:17759267 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | 0.761 |
| SCO1675 | SCO1676 | gene:17759268 | gene:17759269 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | SCI52.18c, possible peptidase, len: 445 aa; similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288, 467 aa; fasta scores: opt: 1595 Z-score: 1853.9 bits: 352.3 E(): 1.1e-95; 54.788% identity in 449 aa overlap, to SW:ACY1_PIG (EMBL:D13514) Sus scrofa aminoacylase-1 (EC 3.5.1.14) Acy1, 406 aa; fasta scores: opt: 368 Z-score: 430.7 bits: 88.7 E(): 2.1e-16; 27.563% identity in 439 aa overlap and to TR:Q9ZBI7 (EMBL:AL035161) Streptomyces coelicolor putative aminoacylase SC9C7.23, 444 aa; fasta scores: opt: 1543 Z-score: 1530.3 bits: 292.3 E(): 1.6e-79; 54.795% i [...] | 0.767 |
| SCO1675 | SCO1677 | gene:17759268 | gene:17759271 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | SCI52.19, conserved hypothetical protein, len: 124 aa; similar to TR:BAB35158 (EMBL:AP002556) Escherichia coli O157:H7 hypothetical 17.0 kDa protein ECS1735, 152 aa; fasta scores: opt: 397 Z-score: 489.0 bits: 96.3 E(): 1.2e-19; 52.033% identity in 123 aa overlap; Belongs to the UPF0225 family. | 0.475 |
| SCO1675 | SCO1950 | gene:17759268 | gene:17759547 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | Hypothetical protein; Involved in cell division and chromosome segregation (By similarity). Involved in sporulation. May coordinate the cessation of aerial hyphae growth and subsequent chromosome segregation and/or septation. Required for expression of the ParB partioning protein during sporogenesis. Activates its own transcription and represses WhiB. Binds with low affinity to its own promoter and to the Parp2 sporulation-specific promoter. Also binds directly to the RNA polymerase sigma factor WhiG, leading to inhibition of WhiG-dependent transcription in a dose-dependent manner ; Be [...] | 0.552 |
| SCO1675 | SCO2718 | gene:17759268 | gene:17760325 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | Putative secreted protein; Probably forms part of the rodlet layer on the spore surface; despite their high similarity both RdlA and RdlB are required for rodlet formation. Plays a role in cell adhesion to polystyrene plates. Does not form amyloid fibrils in vitro, unlike RdlB. Belongs to the rodlin family. | 0.770 |
| SCO1675 | SCO2719 | gene:17759268 | gene:17760326 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | Putative secreted protein; Forms part of the rodlet layer on the spore surface; despite their high similarity both RdlA and RdlB are required for rodlet formation. Plays a role in cell adhesion to polystyrene plates. Forms amyloid-like fibrils in vitro composed of stacked beta-sheets. Belongs to the rodlin family. | 0.770 |
| SCO1675 | SCO3926 | gene:17759268 | gene:17761553 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | SCQ11.09, ssgA, probable regulator, len: 136 aa; highly similar to TR:P95753 (EMBL:D50051), SsgA, Streptomyces griseus protein associated with sporulation and cell division (136 aa), fasta scores; opt: 715 z-score: 896.6 E(): 0, 77.9% identity in 136 aa overlap and similar to others from S.coelicolor e.g. SC5F2A.05c (EMBL:AL049587) possible regulator (138 aa) (35.7% identity in 115 aa overlap) and SC5H1.03 (EMBL:AL049863) possible regulator (142 aa) (2.5% identity in 114 aa overlap), both annotated by similarity to Streptomyces griseus SsgA. The start codon was selected by similarity t [...] | 0.556 |
| SCO1675 | SCO6682 | gene:17759268 | gene:17764340 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | Hypothetical protein SC5A7.32; [Lanthionine-containing peptide SapB precursor RamS]: Stably accumulated precursor of SapB. Belongs to the lanthionine-containing morphogen family. | 0.414 |
| SCO1675 | SCO7637 | gene:17759268 | gene:17765297 | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | SC10F4.10c, secreted endoglucanase, len: 486 aa; highly similar to SW:GUNA_STRLI (EMBL:M82807) Streptomyces lividans endoglucanase CelA precursor (EC 3.2.1.4) CelA, 459 aa; fasta scores: opt: 2977 z-score: 3136.1 E(): 0; 97.4% identity in 461 aa overlap. Contains Pfam matches to entries PF00553 CBD_2, Cellulose binding domain and PF00150 cellulase, Cellulase (glycosyl hydrolase family 5) and matches to Prosite entries PS00561 Cellulose-binding domain, bacterial type and PS00659 Glycosyl hydrolases family 5 signature. Also contains possible N-terminal region signal peptide sequence. | 0.689 |
| SCO1676 | SCO1674 | gene:17759269 | gene:17759267 | SCI52.18c, possible peptidase, len: 445 aa; similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288, 467 aa; fasta scores: opt: 1595 Z-score: 1853.9 bits: 352.3 E(): 1.1e-95; 54.788% identity in 449 aa overlap, to SW:ACY1_PIG (EMBL:D13514) Sus scrofa aminoacylase-1 (EC 3.5.1.14) Acy1, 406 aa; fasta scores: opt: 368 Z-score: 430.7 bits: 88.7 E(): 2.1e-16; 27.563% identity in 439 aa overlap and to TR:Q9ZBI7 (EMBL:AL035161) Streptomyces coelicolor putative aminoacylase SC9C7.23, 444 aa; fasta scores: opt: 1543 Z-score: 1530.3 bits: 292.3 E(): 1.6e-79; 54.795% i [...] | Putative secreted protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. A minimal chaplin strain capable of forming aerial mycelium/hyphae o [...] | 0.685 |
| SCO1676 | SCO1675 | gene:17759269 | gene:17759268 | SCI52.18c, possible peptidase, len: 445 aa; similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288, 467 aa; fasta scores: opt: 1595 Z-score: 1853.9 bits: 352.3 E(): 1.1e-95; 54.788% identity in 449 aa overlap, to SW:ACY1_PIG (EMBL:D13514) Sus scrofa aminoacylase-1 (EC 3.5.1.14) Acy1, 406 aa; fasta scores: opt: 368 Z-score: 430.7 bits: 88.7 E(): 2.1e-16; 27.563% identity in 439 aa overlap and to TR:Q9ZBI7 (EMBL:AL035161) Streptomyces coelicolor putative aminoacylase SC9C7.23, 444 aa; fasta scores: opt: 1543 Z-score: 1530.3 bits: 292.3 E(): 1.6e-79; 54.795% i [...] | Putative small membrane protein; One of 8 partially redundant surface-active proteins required for efficient formation of aerial mycelium; the short chaplins assemble into a hydrophobic, amyloidal fibrillar surface layer that envelopes and protects aerial hyphae and spores, presumably anchored to the long chaplins. Chaplins have an overlapping function with the surface-active SapB peptide; chaplins are essential on minimal medium while on rich medium both chaplins and SapB are required for efficient aerial hyphae formation. Chaplins are also involved in cell attachment to a hydrophobic [...] | 0.767 |
| SCO1676 | SCO1677 | gene:17759269 | gene:17759271 | SCI52.18c, possible peptidase, len: 445 aa; similar to TR:Q9CC46 (EMBL:AL583921) Mycobacterium leprae possible peptidase ML1288, 467 aa; fasta scores: opt: 1595 Z-score: 1853.9 bits: 352.3 E(): 1.1e-95; 54.788% identity in 449 aa overlap, to SW:ACY1_PIG (EMBL:D13514) Sus scrofa aminoacylase-1 (EC 3.5.1.14) Acy1, 406 aa; fasta scores: opt: 368 Z-score: 430.7 bits: 88.7 E(): 2.1e-16; 27.563% identity in 439 aa overlap and to TR:Q9ZBI7 (EMBL:AL035161) Streptomyces coelicolor putative aminoacylase SC9C7.23, 444 aa; fasta scores: opt: 1543 Z-score: 1530.3 bits: 292.3 E(): 1.6e-79; 54.795% i [...] | SCI52.19, conserved hypothetical protein, len: 124 aa; similar to TR:BAB35158 (EMBL:AP002556) Escherichia coli O157:H7 hypothetical 17.0 kDa protein ECS1735, 152 aa; fasta scores: opt: 397 Z-score: 489.0 bits: 96.3 E(): 1.2e-19; 52.033% identity in 123 aa overlap; Belongs to the UPF0225 family. | 0.712 |
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