Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCO5068 | SCO5069 | gene:17762717 | gene:17762718 | SCBAC20F6.11c, possible tetR-family transcriptional regulator, len: 199 aa; similar to many actinomycetes putative tetR-family transcriptional regulators, e.g. TR:Q9RJL5 (EMBL:AL121849) Streptomyces coelicolor putative tetR-family transcriptional regulator SCF6.16, 194 aa; fasta scores: opt: 419 Z-score: 483.9 bits: 96.4 E(): 2.3e-19; 38.095% identity in 189 aa overlap. Contains Pfam match to entry PF00440 tetR, Bacterial regulatory proteins, tetR family and possible helix-turn-helix motif at residues 36..57 (+4.64 SD). | SCBAC20F6.12, possible oxidoreductase, len: 318 aa; similar to many oxidoreductases/dehydratases, e.g. TR:Q9WX20 (EMBL:AL079345) Streptomyces coelicolor putative dehydrogenase SCE68.12c, 318 aa; fasta scores: opt: 998 Z-score: 1062.9 bits: 204.9 E(): 1.3e-51; 52.997% identity in 317 aa overlap. Contains Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases. | 0.533 |
| SCO5069 | SCO5068 | gene:17762718 | gene:17762717 | SCBAC20F6.12, possible oxidoreductase, len: 318 aa; similar to many oxidoreductases/dehydratases, e.g. TR:Q9WX20 (EMBL:AL079345) Streptomyces coelicolor putative dehydrogenase SCE68.12c, 318 aa; fasta scores: opt: 998 Z-score: 1062.9 bits: 204.9 E(): 1.3e-51; 52.997% identity in 317 aa overlap. Contains Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases. | SCBAC20F6.11c, possible tetR-family transcriptional regulator, len: 199 aa; similar to many actinomycetes putative tetR-family transcriptional regulators, e.g. TR:Q9RJL5 (EMBL:AL121849) Streptomyces coelicolor putative tetR-family transcriptional regulator SCF6.16, 194 aa; fasta scores: opt: 419 Z-score: 483.9 bits: 96.4 E(): 2.3e-19; 38.095% identity in 189 aa overlap. Contains Pfam match to entry PF00440 tetR, Bacterial regulatory proteins, tetR family and possible helix-turn-helix motif at residues 36..57 (+4.64 SD). | 0.533 |