node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCO3264 | SCO5231 | gene:17760883 | gene:17762882 | SCE39.14c, possible gntR-family regulator, len: 243aa; weak similarity to many egs. SW:FARR_ECOLI fatty acyl responsive regulator from Escherichia coli (240 aa) fasta scores; opt: 196, z-score: 243.9, E(): 2.8e-06, (24.3% identity in 243 aa overlap) and SW:KORA_STRLI KorA protein found to control plasmid transfer in the Streptomyces lividans plasmid pIJ101 (241 aa) fasta scores; opt: 158, z-score: 198.3, E(): 0.00098, (22.0% identity in 227 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family and Prosite match to PS00043 Bacterial regulator [...] | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.754 |
SCO3269 | SCO3932 | gene:17760888 | gene:17761559 | SCE39.19, possible gntR-family regulator, len: 251 aa; some similarity to many egs. TR:Q07191 (EMBL:AJ005260) KorSA protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores; opt: 327, z-score: 380.9, E(): 6.7e-14, (31.0% identity in 252 aa overlap) and TR:O86763 (EMBL:AL031035) KorSA transcriptional regulator from Streptomyces coelicolor cosmid 6A9 (259 aa) fasta scores; opt: 326, z-score: 379.7, E(): 7.7e-14, (28.9% identity in 249 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family. Also con [...] | SCQ11.15c, probable gntR-family transcriptional regulator, len: 295 aa; similar to many e.g. TR:Q07191 (EMBL:Z19589), KorSA, Streptomyces ambofaciens plasmid pSAM2 transcriptional repressor (259 aa), fasta scores; opt: 292 z-score: 359.5 E(): 1.1e-12, 30.4% identity in 253 aa overlap. Also similar to CDS from other putative integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573), korSA, regulatory protein (259 aa) (30.8% identity in 253 aa overlap). Part of a putative integrated plasmid similar to pSAM2. Contains probable helix-turn-helix motif at aa 35-56 (Score 1296, +3.60 [...] | 0.721 |
SCO3269 | SCO5231 | gene:17760888 | gene:17762882 | SCE39.19, possible gntR-family regulator, len: 251 aa; some similarity to many egs. TR:Q07191 (EMBL:AJ005260) KorSA protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores; opt: 327, z-score: 380.9, E(): 6.7e-14, (31.0% identity in 252 aa overlap) and TR:O86763 (EMBL:AL031035) KorSA transcriptional regulator from Streptomyces coelicolor cosmid 6A9 (259 aa) fasta scores; opt: 326, z-score: 379.7, E(): 7.7e-14, (28.9% identity in 249 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family. Also con [...] | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.763 |
SCO3932 | SCO3269 | gene:17761559 | gene:17760888 | SCQ11.15c, probable gntR-family transcriptional regulator, len: 295 aa; similar to many e.g. TR:Q07191 (EMBL:Z19589), KorSA, Streptomyces ambofaciens plasmid pSAM2 transcriptional repressor (259 aa), fasta scores; opt: 292 z-score: 359.5 E(): 1.1e-12, 30.4% identity in 253 aa overlap. Also similar to CDS from other putative integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573), korSA, regulatory protein (259 aa) (30.8% identity in 253 aa overlap). Part of a putative integrated plasmid similar to pSAM2. Contains probable helix-turn-helix motif at aa 35-56 (Score 1296, +3.60 [...] | SCE39.19, possible gntR-family regulator, len: 251 aa; some similarity to many egs. TR:Q07191 (EMBL:AJ005260) KorSA protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores; opt: 327, z-score: 380.9, E(): 6.7e-14, (31.0% identity in 252 aa overlap) and TR:O86763 (EMBL:AL031035) KorSA transcriptional regulator from Streptomyces coelicolor cosmid 6A9 (259 aa) fasta scores; opt: 326, z-score: 379.7, E(): 7.7e-14, (28.9% identity in 249 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family. Also con [...] | 0.721 |
SCO3932 | SCO3981 | gene:17761559 | gene:17761609 | SCQ11.15c, probable gntR-family transcriptional regulator, len: 295 aa; similar to many e.g. TR:Q07191 (EMBL:Z19589), KorSA, Streptomyces ambofaciens plasmid pSAM2 transcriptional repressor (259 aa), fasta scores; opt: 292 z-score: 359.5 E(): 1.1e-12, 30.4% identity in 253 aa overlap. Also similar to CDS from other putative integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573), korSA, regulatory protein (259 aa) (30.8% identity in 253 aa overlap). Part of a putative integrated plasmid similar to pSAM2. Contains probable helix-turn-helix motif at aa 35-56 (Score 1296, +3.60 [...] | SCBAC25E3.18c, possible GntR-family transcriptional regulator, len: 251aa: similar to many eg. TR:Q07191 (EMBL:Z19589) KorSA regulatory protein from Streptomyces ambofaciens plasmid pSAM2 (259 aa) fasta scores; opt: 323, Z-score: 366.6, 30.952% identity (32.911% ungapped) in 252 aa overlap. Also strongly similar to TR:Q9X8E2 (EMBL:AL049573) putative GntR-family regulator SCE39.19 from Streptomyces coelicolor (251 aa) fasta scores; opt: 1603, Z-score: 1776.4, 96.386% identity (96.386% ungapped) in 249 aa overlap. Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, [...] | 0.705 |
SCO3932 | SCO5231 | gene:17761559 | gene:17762882 | SCQ11.15c, probable gntR-family transcriptional regulator, len: 295 aa; similar to many e.g. TR:Q07191 (EMBL:Z19589), KorSA, Streptomyces ambofaciens plasmid pSAM2 transcriptional repressor (259 aa), fasta scores; opt: 292 z-score: 359.5 E(): 1.1e-12, 30.4% identity in 253 aa overlap. Also similar to CDS from other putative integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573), korSA, regulatory protein (259 aa) (30.8% identity in 253 aa overlap). Part of a putative integrated plasmid similar to pSAM2. Contains probable helix-turn-helix motif at aa 35-56 (Score 1296, +3.60 [...] | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.733 |
SCO3981 | SCO3932 | gene:17761609 | gene:17761559 | SCBAC25E3.18c, possible GntR-family transcriptional regulator, len: 251aa: similar to many eg. TR:Q07191 (EMBL:Z19589) KorSA regulatory protein from Streptomyces ambofaciens plasmid pSAM2 (259 aa) fasta scores; opt: 323, Z-score: 366.6, 30.952% identity (32.911% ungapped) in 252 aa overlap. Also strongly similar to TR:Q9X8E2 (EMBL:AL049573) putative GntR-family regulator SCE39.19 from Streptomyces coelicolor (251 aa) fasta scores; opt: 1603, Z-score: 1776.4, 96.386% identity (96.386% ungapped) in 249 aa overlap. Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, [...] | SCQ11.15c, probable gntR-family transcriptional regulator, len: 295 aa; similar to many e.g. TR:Q07191 (EMBL:Z19589), KorSA, Streptomyces ambofaciens plasmid pSAM2 transcriptional repressor (259 aa), fasta scores; opt: 292 z-score: 359.5 E(): 1.1e-12, 30.4% identity in 253 aa overlap. Also similar to CDS from other putative integrated plasmids in S.coelicolor e.g. SCE39.09c (EMBL:AL049573), korSA, regulatory protein (259 aa) (30.8% identity in 253 aa overlap). Part of a putative integrated plasmid similar to pSAM2. Contains probable helix-turn-helix motif at aa 35-56 (Score 1296, +3.60 [...] | 0.705 |
SCO3981 | SCO5231 | gene:17761609 | gene:17762882 | SCBAC25E3.18c, possible GntR-family transcriptional regulator, len: 251aa: similar to many eg. TR:Q07191 (EMBL:Z19589) KorSA regulatory protein from Streptomyces ambofaciens plasmid pSAM2 (259 aa) fasta scores; opt: 323, Z-score: 366.6, 30.952% identity (32.911% ungapped) in 252 aa overlap. Also strongly similar to TR:Q9X8E2 (EMBL:AL049573) putative GntR-family regulator SCE39.19 from Streptomyces coelicolor (251 aa) fasta scores; opt: 1603, Z-score: 1776.4, 96.386% identity (96.386% ungapped) in 249 aa overlap. Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, [...] | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.760 |
SCO4230 | SCO5231 | gene:17761874 | gene:17762882 | SCD8A.03, probable response regulator, len: 223 aa; similar to TR:O86269 (EMBL:AJ001103) Lactococcus lactis ArcA protein, 233 aa; fasta scores: opt: 700 z-score: 810.0 E(): 0; 49.3% identity in 223 aa overlap and to TR:Q56180 (EMBL:U38917) Synechococcus sp. response regulator PhoB, 234 aa; fasta scores: opt: 687 z-score: 795.1 E(): 0; 48.0% identity in 229 aa overlap, and similar to many S. coelicolor response regulators, e.g. SCH22A.19c, 256 aa; fasta scores: opt: 687 z-score: 696.9 E(): 2.5e-33; 49.1% identity in 224 aa overlap. Contains Pfam matches to entries PF00072 response_reg, [...] | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.794 |
SCO5228 | SCO5229 | gene:17762879 | gene:17762880 | SC7E4.25c, possible acetyltransferase, len: 168 aa; similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor putative acetyltransferase SC5F7.12c, 169 aa; fasta scores: opt: 151 z-score: 187.3 E(): 0.0058; 36.2% identity in 141 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family. | SC7E4.26c, probable permease, len: 4532 aa; similar to TR:Q47552 (EMBL:L01152) Escherichia coli proline permease (fragment) PutP, 489 aa; fasta scores: opt: 333 z-score: 378.7 E(): 1.3e-13; 23.8% identity in 495 aa overlap. Contains Pfam match to entry PF00474 SSF, Sodium:solute symporter family. Contains also possible hydrophobic membrane spanning regions; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.797 |
SCO5228 | SCO5230 | gene:17762879 | gene:17762881 | SC7E4.25c, possible acetyltransferase, len: 168 aa; similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor putative acetyltransferase SC5F7.12c, 169 aa; fasta scores: opt: 151 z-score: 187.3 E(): 0.0058; 36.2% identity in 141 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family. | SC7E4.27c, possible integral membrane protein, len: 94 aa. Contains possible hydrophobic membrane spanning regions. | 0.820 |
SCO5228 | SCO5231 | gene:17762879 | gene:17762882 | SC7E4.25c, possible acetyltransferase, len: 168 aa; similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor putative acetyltransferase SC5F7.12c, 169 aa; fasta scores: opt: 151 z-score: 187.3 E(): 0.0058; 36.2% identity in 141 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family. | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.723 |
SCO5229 | SCO5228 | gene:17762880 | gene:17762879 | SC7E4.26c, probable permease, len: 4532 aa; similar to TR:Q47552 (EMBL:L01152) Escherichia coli proline permease (fragment) PutP, 489 aa; fasta scores: opt: 333 z-score: 378.7 E(): 1.3e-13; 23.8% identity in 495 aa overlap. Contains Pfam match to entry PF00474 SSF, Sodium:solute symporter family. Contains also possible hydrophobic membrane spanning regions; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | SC7E4.25c, possible acetyltransferase, len: 168 aa; similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor putative acetyltransferase SC5F7.12c, 169 aa; fasta scores: opt: 151 z-score: 187.3 E(): 0.0058; 36.2% identity in 141 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family. | 0.797 |
SCO5229 | SCO5230 | gene:17762880 | gene:17762881 | SC7E4.26c, probable permease, len: 4532 aa; similar to TR:Q47552 (EMBL:L01152) Escherichia coli proline permease (fragment) PutP, 489 aa; fasta scores: opt: 333 z-score: 378.7 E(): 1.3e-13; 23.8% identity in 495 aa overlap. Contains Pfam match to entry PF00474 SSF, Sodium:solute symporter family. Contains also possible hydrophobic membrane spanning regions; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | SC7E4.27c, possible integral membrane protein, len: 94 aa. Contains possible hydrophobic membrane spanning regions. | 0.968 |
SCO5229 | SCO5231 | gene:17762880 | gene:17762882 | SC7E4.26c, probable permease, len: 4532 aa; similar to TR:Q47552 (EMBL:L01152) Escherichia coli proline permease (fragment) PutP, 489 aa; fasta scores: opt: 333 z-score: 378.7 E(): 1.3e-13; 23.8% identity in 495 aa overlap. Contains Pfam match to entry PF00474 SSF, Sodium:solute symporter family. Contains also possible hydrophobic membrane spanning regions; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.777 |
SCO5230 | SCO5228 | gene:17762881 | gene:17762879 | SC7E4.27c, possible integral membrane protein, len: 94 aa. Contains possible hydrophobic membrane spanning regions. | SC7E4.25c, possible acetyltransferase, len: 168 aa; similar to TR:Q9S2P7 (EMBL:AL096872) Streptomyces coelicolor putative acetyltransferase SC5F7.12c, 169 aa; fasta scores: opt: 151 z-score: 187.3 E(): 0.0058; 36.2% identity in 141 aa overlap. Contains Pfam match to entry PF00583 Acetyltransf, Acetyltransferase (GNAT) family. | 0.820 |
SCO5230 | SCO5229 | gene:17762881 | gene:17762880 | SC7E4.27c, possible integral membrane protein, len: 94 aa. Contains possible hydrophobic membrane spanning regions. | SC7E4.26c, probable permease, len: 4532 aa; similar to TR:Q47552 (EMBL:L01152) Escherichia coli proline permease (fragment) PutP, 489 aa; fasta scores: opt: 333 z-score: 378.7 E(): 1.3e-13; 23.8% identity in 495 aa overlap. Contains Pfam match to entry PF00474 SSF, Sodium:solute symporter family. Contains also possible hydrophobic membrane spanning regions; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.968 |
SCO5230 | SCO5231 | gene:17762881 | gene:17762882 | SC7E4.27c, possible integral membrane protein, len: 94 aa. Contains possible hydrophobic membrane spanning regions. | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | 0.777 |
SCO5231 | SCO3264 | gene:17762882 | gene:17760883 | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | SCE39.14c, possible gntR-family regulator, len: 243aa; weak similarity to many egs. SW:FARR_ECOLI fatty acyl responsive regulator from Escherichia coli (240 aa) fasta scores; opt: 196, z-score: 243.9, E(): 2.8e-06, (24.3% identity in 243 aa overlap) and SW:KORA_STRLI KorA protein found to control plasmid transfer in the Streptomyces lividans plasmid pIJ101 (241 aa) fasta scores; opt: 158, z-score: 198.3, E(): 0.00098, (22.0% identity in 227 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family and Prosite match to PS00043 Bacterial regulator [...] | 0.754 |
SCO5231 | SCO3269 | gene:17762882 | gene:17760888 | Putative gntR-family transcriptional regulator; Global regulator that is part of the nutrient-sensing system. In the absence of glucosamine 6-P (GlcN6P), represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin, as well as several genes involved in development, thereby linking carbon availability to morphogenesis. Also regulates the expression of the ABC transporters DasABC and NgcEFG, which are involved in N,N'-diacetylchitobiose ((GlcNAc)2) uptake. Binds to the DNA consensus sequence 5'-ACTG [...] | SCE39.19, possible gntR-family regulator, len: 251 aa; some similarity to many egs. TR:Q07191 (EMBL:AJ005260) KorSA protein from the integrated conjugative plasmid pSAM2 of Streptomyces ambofaciens (259 aa) fasta scores; opt: 327, z-score: 380.9, E(): 6.7e-14, (31.0% identity in 252 aa overlap) and TR:O86763 (EMBL:AL031035) KorSA transcriptional regulator from Streptomyces coelicolor cosmid 6A9 (259 aa) fasta scores; opt: 326, z-score: 379.7, E(): 7.7e-14, (28.9% identity in 249 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family. Also con [...] | 0.763 |