node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCO2026 | SCO6349 | gene:17759624 | gene:17764008 | SC3A3.04c, gltB, probable glutamate synthase large subunit, len: 1514 aa; similar to bacterial glutamate synthases e.g. TR:Q51583 (EMBL:D85230), gltB, Plectonema boryanum large subunit of NADH-dependent glutamate synthase (1530 aa), fasta scores; opt: 5662 z-score: 6172.3 E(): 0, 56.4% identity in 1518 aa overlap. Also similar to part of eukaryotic glutamate synthases e.g. SW:GLSN_MEDSA (EMBL:L01660) Medicago sativa (Alfalfa) Glutamate synthase [NADH] precursor (2194 aa) (49.9% identity in 1577 aa overlap). | SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19. | 0.823 |
SCO2747 | SCO6349 | gene:17760354 | gene:17764008 | SCC57A.18, bifunctional carbohydrate binding and transport protein, len: 613 aa. The N-terminus is highly similar to many ribose transport system permeases e.g. Escherichia coli SW:RBSC_ECOLI(EMBL:L10328) ribose transport system permease protein RbsC (321 aa), fasta scores opt: 846 z-score: 833.8 E(): 0 47.1% identity in 310 aa overlap. The C-terminus is highly similar to many ribose-binding proteins e.g. Escherichia coli SW:RBSB_ECOLI(EMBL:K00511) D-ribose-binding periplasmic protein precursor (296 aa), fasta scores opt: 863 z-score: 847.0 E():0 46.9% identity in 303 aa overlap. Conta [...] | SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19. | 0.427 |
SCO6348 | SCO6349 | gene:17764007 | gene:17764008 | SC3A7.16c, putative membrane protein, len: 1361 aa. Contains possible hydrophobic membrane spanning regions. | SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19. | 0.498 |
SCO6349 | SCO2026 | gene:17764008 | gene:17759624 | SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19. | SC3A3.04c, gltB, probable glutamate synthase large subunit, len: 1514 aa; similar to bacterial glutamate synthases e.g. TR:Q51583 (EMBL:D85230), gltB, Plectonema boryanum large subunit of NADH-dependent glutamate synthase (1530 aa), fasta scores; opt: 5662 z-score: 6172.3 E(): 0, 56.4% identity in 1518 aa overlap. Also similar to part of eukaryotic glutamate synthases e.g. SW:GLSN_MEDSA (EMBL:L01660) Medicago sativa (Alfalfa) Glutamate synthase [NADH] precursor (2194 aa) (49.9% identity in 1577 aa overlap). | 0.823 |
SCO6349 | SCO2747 | gene:17764008 | gene:17760354 | SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19. | SCC57A.18, bifunctional carbohydrate binding and transport protein, len: 613 aa. The N-terminus is highly similar to many ribose transport system permeases e.g. Escherichia coli SW:RBSC_ECOLI(EMBL:L10328) ribose transport system permease protein RbsC (321 aa), fasta scores opt: 846 z-score: 833.8 E(): 0 47.1% identity in 310 aa overlap. The C-terminus is highly similar to many ribose-binding proteins e.g. Escherichia coli SW:RBSB_ECOLI(EMBL:K00511) D-ribose-binding periplasmic protein precursor (296 aa), fasta scores opt: 863 z-score: 847.0 E():0 46.9% identity in 303 aa overlap. Conta [...] | 0.427 |
SCO6349 | SCO6348 | gene:17764008 | gene:17764007 | SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19. | SC3A7.16c, putative membrane protein, len: 1361 aa. Contains possible hydrophobic membrane spanning regions. | 0.498 |