Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCO2617 | SCO2619 | gene:17760221 | gene:17760223 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | 0.999 |
| SCO2617 | SCO3373 | gene:17760221 | gene:17760995 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | 0.648 |
| SCO2617 | SCO4761 | gene:17760221 | gene:17762410 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 10 kD chaperonin cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.765 |
| SCO2617 | SCO4762 | gene:17760221 | gene:17762411 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 60 kD chaperonin cpn60; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.636 |
| SCO2617 | SCO5285 | gene:17760221 | gene:17762936 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.811 |
| SCO2617 | SCO7280 | gene:17760221 | gene:17764940 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Putative ATP-dependent Clp protease proteolytic subunit 2; Has lost one of the conserved residue (His) proposed to be part of the active site. Therefore it could be inactive. | 0.994 |
| SCO2617 | SCO7281 | gene:17760221 | gene:17764941 | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Putative ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.997 |
| SCO2619 | SCO2617 | gene:17760223 | gene:17760221 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.999 |
| SCO2619 | SCO3373 | gene:17760223 | gene:17760995 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | 0.806 |
| SCO2619 | SCO3619 | gene:17760223 | gene:17761242 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.404 |
| SCO2619 | SCO4761 | gene:17760223 | gene:17762410 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | 10 kD chaperonin cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.821 |
| SCO2619 | SCO4762 | gene:17760223 | gene:17762411 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | 60 kD chaperonin cpn60; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.843 |
| SCO2619 | SCO5285 | gene:17760223 | gene:17762936 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | ATP-dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.812 |
| SCO2619 | SCO7280 | gene:17760223 | gene:17764940 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | Putative ATP-dependent Clp protease proteolytic subunit 2; Has lost one of the conserved residue (His) proposed to be part of the active site. Therefore it could be inactive. | 0.982 |
| SCO2619 | SCO7281 | gene:17760223 | gene:17764941 | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | Putative ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.584 |
| SCO3373 | SCO2617 | gene:17760995 | gene:17760221 | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | ATP dependent Clp Protease ATP binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.648 |
| SCO3373 | SCO2619 | gene:17760995 | gene:17760223 | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | ATP dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Probably partially responsible for degradation of ECF sigma factor SigR prime; Belongs to the peptidase S14 family. | 0.806 |
| SCO3373 | SCO4761 | gene:17760995 | gene:17762410 | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | 10 kD chaperonin cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.717 |
| SCO3373 | SCO4762 | gene:17760995 | gene:17762411 | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | 60 kD chaperonin cpn60; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.657 |
| SCO3373 | SCO5285 | gene:17760995 | gene:17762936 | SCE94.24c, probable Clp-family ATP-binding protease, len: 841aa; highly similar to many egs. SW:MECB_BACSU MecB/ClpC pleiotropic regulator controlling competence gene expression and growth at high temperature in Bacillus subtilis (810 aa) fasta scores; opt: 3266, z-score: 3278.7, E(): 0, (61.6% identity in 805 aa overlap) and TR:Q48760 (EMBL:U40604) ClpC ATPase required for stress tolerance and in vivo survival of Listeria monocytogenes (825 aa) fasta scores; opt: 3204, z-score: 3216.3, E(): 0, (61.2% identity in 804 aa overlap). Also similar to TR:O69936 (EMBL:AL023861) clp protease A [...] | ATP-dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.616 |
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