STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA81839.1Substrate-binding region of ABC-type glycine betaine transport system. (317 aa)    
Predicted Functional Partners:
AEA81838.1
L-proline glycine betaine ABC transport system permease protein ProW.
 
 0.999
AEA81841.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
    
  0.525
AEA81840.1
Hypothetical protein.
       0.425
Your Current Organism:
Pelagibacter sp. IMCC9063
NCBI taxonomy Id: 1002672
Other names: C. Pelagibacter sp. IMCC9063, Candidatus Pelagibacter sp. IMCC9063, marine bacterium IMCC9063
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.