STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB79422.1Glutamate decarboxylase. (263 aa)    
Predicted Functional Partners:
CCB79423.1
Glutamate decarboxylase.
   
 0.994
CCB80220.1
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.948
CCB80494.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
   
 0.943
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.933
CCB80381.1
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.911
CCB79684.1
Glutamine synthetase type I.
  
 
 0.910
CCB79794.1
Gamma-glutamyltranspeptidase.
     
 0.910
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.901
CCB79470.1
Phosphoribosylformylglycinamidine synthase,synthetase subunit.
     
  0.900
CCB79144.1
Aspartate aminotransferase.
  
 
 0.817
Your Current Organism:
Helicobacter bizzozeronii CIII1
NCBI taxonomy Id: 1002804
Other names: H. bizzozeronii CIII-1, Helicobacter bizzozeronii CIII-1, Helicobacter bizzozeronii str. CIII-1, Helicobacter bizzozeronii strain CIII-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.