Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCB79161.1 | CCB79892.1 | HBZC1_01750 | HBZC1_09060 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.866 |
CCB79161.1 | CCB79961.1 | HBZC1_01750 | HBZC1_09750 | Hypothetical protein. | LSU ribosomal protein L3p (L3e). | 0.867 |
CCB79161.1 | CCB80102.1 | HBZC1_01750 | HBZC1_11160 | Hypothetical protein. | Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.922 |
CCB79161.1 | rplM | HBZC1_01750 | HBZC1_01090 | Hypothetical protein. | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.888 |
CCB79161.1 | rplO | HBZC1_01750 | HBZC1_09930 | Hypothetical protein. | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.867 |
CCB79161.1 | rplQ | HBZC1_01750 | HBZC1_09590 | Hypothetical protein. | LSU ribosomal protein L17p. | 0.889 |
CCB79161.1 | ybeY | HBZC1_01750 | HBZC1_18430 | Hypothetical protein. | FIG000233: metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.916 |
CCB79892.1 | CCB79161.1 | HBZC1_09060 | HBZC1_01750 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Hypothetical protein. | 0.866 |
CCB79892.1 | CCB79961.1 | HBZC1_09060 | HBZC1_09750 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | LSU ribosomal protein L3p (L3e). | 0.874 |
CCB79892.1 | CCB80102.1 | HBZC1_09060 | HBZC1_11160 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.907 |
CCB79892.1 | rplM | HBZC1_09060 | HBZC1_01090 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.895 |
CCB79892.1 | rplO | HBZC1_09060 | HBZC1_09930 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.894 |
CCB79892.1 | rplQ | HBZC1_09060 | HBZC1_09590 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | LSU ribosomal protein L17p. | 0.889 |
CCB79892.1 | ybeY | HBZC1_09060 | HBZC1_18430 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | FIG000233: metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.865 |
CCB79961.1 | CCB79161.1 | HBZC1_09750 | HBZC1_01750 | LSU ribosomal protein L3p (L3e). | Hypothetical protein. | 0.867 |
CCB79961.1 | CCB79892.1 | HBZC1_09750 | HBZC1_09060 | LSU ribosomal protein L3p (L3e). | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.874 |
CCB79961.1 | CCB80102.1 | HBZC1_09750 | HBZC1_11160 | LSU ribosomal protein L3p (L3e). | Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.910 |
CCB79961.1 | rnc | HBZC1_09750 | HBZC1_05900 | LSU ribosomal protein L3p (L3e). | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.919 |
CCB79961.1 | rplM | HBZC1_09750 | HBZC1_01090 | LSU ribosomal protein L3p (L3e). | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
CCB79961.1 | rplO | HBZC1_09750 | HBZC1_09930 | LSU ribosomal protein L3p (L3e). | LSU ribosomal protein L15p (L27Ae); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
page 1 of 5