Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B3galnt2 | Dag1 | G3I3U1 | G3H8F4 | Hexosyltransferase. | Dystroglycan. | 0.804 |
B3galnt2 | Eogt | G3I3U1 | G3GS65 | Hexosyltransferase. | EGF-O-GlcNAc transferase. | 0.582 |
B3galnt2 | Man2c1 | G3I3U1 | G3H0F1 | Hexosyltransferase. | Alpha-mannosidase 2C1. | 0.552 |
B3galt2 | Eogt | G3HUN8 | G3GS65 | Hexosyltransferase. | EGF-O-GlcNAc transferase. | 0.577 |
B3galt2 | Man2c1 | G3HUN8 | G3H0F1 | Hexosyltransferase. | Alpha-mannosidase 2C1. | 0.553 |
Dag1 | B3galnt2 | G3H8F4 | G3I3U1 | Dystroglycan. | Hexosyltransferase. | 0.804 |
Dag1 | Eogt | G3H8F4 | G3GS65 | Dystroglycan. | EGF-O-GlcNAc transferase. | 0.859 |
Eogt | B3galnt2 | G3GS65 | G3I3U1 | EGF-O-GlcNAc transferase. | Hexosyltransferase. | 0.582 |
Eogt | B3galt2 | G3GS65 | G3HUN8 | EGF-O-GlcNAc transferase. | Hexosyltransferase. | 0.577 |
Eogt | Dag1 | G3GS65 | G3H8F4 | EGF-O-GlcNAc transferase. | Dystroglycan. | 0.859 |
Eogt | I79_017261 | G3GS65 | G3I1J9 | EGF-O-GlcNAc transferase. | KTEL motif-containing protein 1. | 0.567 |
Eogt | I79_022343 | G3GS65 | G3IF31 | EGF-O-GlcNAc transferase. | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit. | 0.597 |
Eogt | Lmbr1 | G3GS65 | G3I7S0 | EGF-O-GlcNAc transferase. | Limb region 1 protein. | 0.574 |
Eogt | Man2c1 | G3GS65 | G3H0F1 | EGF-O-GlcNAc transferase. | Alpha-mannosidase 2C1. | 0.574 |
Eogt | Oga | G3GS65 | G3HXU9 | EGF-O-GlcNAc transferase. | Bifunctional protein NCOAT. | 0.570 |
Eogt | POFUT1 | G3GS65 | P83337 | EGF-O-GlcNAc transferase. | GDP-fucose protein O-fucosyltransferase 1; Catalyzes the reaction that attaches fucose through an O- glycosidic linkage to a conserved serine or threonine residue found in the consensus sequence C2-X(4,5)-[S/T]-C3 of EGF domains, where C2 and C3 are the second and third conserved cysteines. Specifically uses GDP- fucose as donor substrate and proper disulfide pairing of the substrate EGF domains is required for fucose transfer. Plays a crucial role in NOTCH signaling. Initial fucosylation of NOTCH by POFUT1 generates a substrate for FRINGE/RFNG, an acetylglucosaminyltransferase that ca [...] | 0.756 |
Eogt | Prickle2 | G3GS65 | G3GS27 | EGF-O-GlcNAc transferase. | Prickle-like protein 2. | 0.615 |
I79_017261 | Eogt | G3I1J9 | G3GS65 | KTEL motif-containing protein 1. | EGF-O-GlcNAc transferase. | 0.567 |
I79_017261 | POFUT1 | G3I1J9 | P83337 | KTEL motif-containing protein 1. | GDP-fucose protein O-fucosyltransferase 1; Catalyzes the reaction that attaches fucose through an O- glycosidic linkage to a conserved serine or threonine residue found in the consensus sequence C2-X(4,5)-[S/T]-C3 of EGF domains, where C2 and C3 are the second and third conserved cysteines. Specifically uses GDP- fucose as donor substrate and proper disulfide pairing of the substrate EGF domains is required for fucose transfer. Plays a crucial role in NOTCH signaling. Initial fucosylation of NOTCH by POFUT1 generates a substrate for FRINGE/RFNG, an acetylglucosaminyltransferase that ca [...] | 0.701 |
I79_022343 | Eogt | G3IF31 | G3GS65 | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit. | EGF-O-GlcNAc transferase. | 0.597 |
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