Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cbfa2t2 | Cbfa2t3 | G3HAM3 | G3GRS4 | Protein CBFA2T2. | Protein CBFA2T3. | 0.623 |
Cbfa2t2 | I79_009832 | G3HAM3 | G3HGU1 | Protein CBFA2T2. | G/T mismatch-specific thymine DNA glycosylase. | 0.692 |
Cbfa2t2 | MED17 | G3HAM3 | G3HSP6 | Protein CBFA2T2. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.642 |
Cbfa2t2 | MED6 | G3HAM3 | G3HTP0 | Protein CBFA2T2. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.610 |
Cbfa2t2 | Med14 | G3HAM3 | G3GSG9 | Protein CBFA2T2. | Mediator of RNA polymerase II transcription subunit 14. | 0.620 |
Cbfa2t2 | Med30 | G3HAM3 | G3H0A1 | Protein CBFA2T2. | Mediator of RNA polymerase II transcription subunit 30. | 0.612 |
Cbfa2t2 | Med7 | G3HAM3 | G3I4G3 | Protein CBFA2T2. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.610 |
Cbfa2t2 | Prdm14 | G3HAM3 | G3I8G4 | Protein CBFA2T2. | PR domain zinc finger protein 14. | 0.949 |
Cbfa2t2 | Prdm6 | G3HAM3 | G3HKB2 | Protein CBFA2T2. | Putative histone-lysine N-methyltransferase PRDM6. | 0.597 |
Cbfa2t2 | Runx1t1 | G3HAM3 | G3HM36 | Protein CBFA2T2. | Protein CBFA2T1. | 0.587 |
Cbfa2t3 | Cbfa2t2 | G3GRS4 | G3HAM3 | Protein CBFA2T3. | Protein CBFA2T2. | 0.623 |
Cbfa2t3 | MED17 | G3GRS4 | G3HSP6 | Protein CBFA2T3. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.642 |
Cbfa2t3 | MED6 | G3GRS4 | G3HTP0 | Protein CBFA2T3. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.610 |
Cbfa2t3 | Med14 | G3GRS4 | G3GSG9 | Protein CBFA2T3. | Mediator of RNA polymerase II transcription subunit 14. | 0.620 |
Cbfa2t3 | Med30 | G3GRS4 | G3H0A1 | Protein CBFA2T3. | Mediator of RNA polymerase II transcription subunit 30. | 0.612 |
Cbfa2t3 | Med7 | G3GRS4 | G3I4G3 | Protein CBFA2T3. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.610 |
Cbfa2t3 | Runx1t1 | G3GRS4 | G3HM36 | Protein CBFA2T3. | Protein CBFA2T1. | 0.481 |
I79_009832 | Cbfa2t2 | G3HGU1 | G3HAM3 | G/T mismatch-specific thymine DNA glycosylase. | Protein CBFA2T2. | 0.692 |
I79_009832 | Prdm14 | G3HGU1 | G3I8G4 | G/T mismatch-specific thymine DNA glycosylase. | PR domain zinc finger protein 14. | 0.421 |
MED17 | Cbfa2t2 | G3HSP6 | G3HAM3 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Protein CBFA2T2. | 0.642 |
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