Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Adam10 | App | G3GRM2 | G3HMG4 | Disintegrin and metalloproteinase domain-containing protein 10. | Amyloid beta A4 protein. | 0.739 |
Adam10 | Bace1 | G3GRM2 | G3IAK4 | Disintegrin and metalloproteinase domain-containing protein 10. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.776 |
Adam10 | Ide | G3GRM2 | G3H3W4 | Disintegrin and metalloproteinase domain-containing protein 10. | Insulin-degrading enzyme; Belongs to the peptidase M16 family. | 0.576 |
Adam10 | Ncstn | G3GRM2 | G3H7X9 | Disintegrin and metalloproteinase domain-containing protein 10. | Nicastrin. | 0.847 |
Adam10 | Psen1 | G3GRM2 | G3HNF2 | Disintegrin and metalloproteinase domain-containing protein 10. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.781 |
Adam10 | Psen2 | G3GRM2 | G3HV76 | Disintegrin and metalloproteinase domain-containing protein 10. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.719 |
App | Adam10 | G3HMG4 | G3GRM2 | Amyloid beta A4 protein. | Disintegrin and metalloproteinase domain-containing protein 10. | 0.739 |
App | Bace1 | G3HMG4 | G3IAK4 | Amyloid beta A4 protein. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.912 |
App | Ide | G3HMG4 | G3H3W4 | Amyloid beta A4 protein. | Insulin-degrading enzyme; Belongs to the peptidase M16 family. | 0.934 |
App | Ncstn | G3HMG4 | G3H7X9 | Amyloid beta A4 protein. | Nicastrin. | 0.950 |
App | Psen1 | G3HMG4 | G3HNF2 | Amyloid beta A4 protein. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.971 |
App | Psen2 | G3HMG4 | G3HV76 | Amyloid beta A4 protein. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.906 |
Bace1 | Adam10 | G3IAK4 | G3GRM2 | Beta-secretase 1; Belongs to the peptidase A1 family. | Disintegrin and metalloproteinase domain-containing protein 10. | 0.776 |
Bace1 | App | G3IAK4 | G3HMG4 | Beta-secretase 1; Belongs to the peptidase A1 family. | Amyloid beta A4 protein. | 0.912 |
Bace1 | Gga1 | G3IAK4 | G3I4Z5 | Beta-secretase 1; Belongs to the peptidase A1 family. | ADP-ribosylation factor-binding protein GGA1. | 0.905 |
Bace1 | I79_012659 | G3IAK4 | G3HPE7 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.729 |
Bace1 | I79_021368 | G3IAK4 | G3ICH0 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.963 |
Bace1 | Ide | G3IAK4 | G3H3W4 | Beta-secretase 1; Belongs to the peptidase A1 family. | Insulin-degrading enzyme; Belongs to the peptidase M16 family. | 0.762 |
Bace1 | Ncstn | G3IAK4 | G3H7X9 | Beta-secretase 1; Belongs to the peptidase A1 family. | Nicastrin. | 0.812 |
Bace1 | Psen1 | G3IAK4 | G3HNF2 | Beta-secretase 1; Belongs to the peptidase A1 family. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.904 |
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