STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubl4bUbiquitin-like protein 4B-like protein. (191 aa)    
Predicted Functional Partners:
Mysm1
Histone H2A deubiquitinase MYSM1.
   
 0.969
Ubxn7
UBX domain-containing protein 7.
    
 0.965
I79_016467
Large proline-rich protein BAT3.
    
 0.949
Trip12
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.903
Rnd2
Next to BRCA1 gene 1 protein.
   
 0.899
Ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.897
I79_022620
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.897
I79_025517
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.897
Get4
UPF0363 protein C7orf20-like.
    
 0.870
Traf7
E3 ubiquitin-protein ligase TRAF7.
   
 0.844
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.