STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pfdn6Prefoldin subunit 6. (127 aa)    
Predicted Functional Partners:
Pfdn5
Prefoldin subunit 5.
   
 0.999
Pfdn1
Prefoldin subunit 1.
   
 0.999
I79_010380
Prefoldin subunit 2.
   
 0.986
I79_014378
Prefoldin subunit 2.
   
 0.986
I79_004947
Prefoldin subunit 3.
   
 0.985
Vbp1
Prefoldin subunit 3.
   
 0.985
I79_003880
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
   
 0.975
Pfdn4
Prefoldin subunit 4.
   
 0.975
Uxt
Protein UXT.
   
 0.935
Tcp1
T-complex protein 1 subunit alpha.
   
 0.897
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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