STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fat2Protocadherin Fat 2. (4352 aa)    
Predicted Functional Partners:
Fjx1
Four-jointed box protein 1.
   
 0.921
Frmd6
FERM domain-containing protein 6 isoform X1.
    
 0.843
Rere
Arginine-glutamic acid dipeptide repeats protein isoform X4.
    
 0.786
Atn1
Atrophin-1 isoform X1.
    
 0.786
Lix1
Protein limb expression 1 homolog.
   
 0.782
Lix1l
LIX1-like protein.
   
 0.782
Csnk1e
Casein kinase I isoform X2; Belongs to the protein kinase superfamily.
    
 0.764
Csnk1d
Casein kinase I isoform X1; Belongs to the protein kinase superfamily.
    
 0.764
Fat4
Protocadherin Fat 4.
   
0.702
Dchs1
Protocadherin-16.
   
0.648
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.