STRINGSTRING
UMN179_00006 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00006" - Hypothetical protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00006Hypothetical protein (465 aa)    
Predicted Functional Partners:
UMN179_00550
Hypothetical protein (129 aa)
   
          0.687
UMN179_00005
Hypothetical protein (110 aa)
              0.681
UMN179_01301
Putative transposase (116 aa)
   
          0.676
UMN179_01902
Hypothetical protein (133 aa)
   
          0.674
UMN179_00931
Sulfite exporter TauE/SafE (265 aa)
   
          0.648
UMN179_01260
Hypothetical protein (304 aa)
   
          0.577
UMN179_00175
Hypothetical protein (287 aa)
   
          0.542
UMN179_01035
Nickel uptake substrate-specific transmembrane region (265 aa)
   
          0.534
UMN179_00004
Putative transposase (104 aa)
              0.522
UMN179_00158
Serine/threonine protein phosphatase (181 aa)
   
          0.514
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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