STRINGSTRING
UMN179_00045 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00045" - Isochorismatase family protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00045Isochorismatase family protein (187 aa)    
Predicted Functional Partners:
UMN179_01418
Salicylate biosynthesis isochorismate synthase (427 aa)
         
    0.951
UMN179_00044
Glycogen branching protein (1513 aa)
   
        0.786
gpsA
Hypothetical protein (334 aa)
   
      0.700
UMN179_00689
Hypothetical protein (245 aa)
 
          0.692
UMN179_00708
Putative nicotinate phosphoribosyltransferase (471 aa)
   
 
  0.681
UMN179_01757
L-tyrosine decarboxylase (510 aa)
     
        0.648
UMN179_02469
Short chain dehydrogenase (240 aa)
 
 
    0.626
UMN179_01273
Nicotinamide-nucleotide adenylyltransferase (420 aa)
         
  0.622
UMN179_00046
Hypothetical protein (248 aa)
              0.598
UMN179_00974
Hypothetical protein (241 aa)
     
 
    0.541
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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