STRINGSTRING
UMN179_00057 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00057" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00057Hypothetical protein (302 aa)    
Predicted Functional Partners:
UMN179_00056
Putative OLD family ATP-dependent endonuclease (524 aa)
              0.624
UMN179_00636
Putative transcriptional regulator (186 aa)
   
          0.601
UMN179_00054
DsrE/DsrF-like family protein (118 aa)
 
          0.519
UMN179_00693
Cytochrome d ubiquinol oxidase subunit III (132 aa)
   
          0.484
UMN179_02461
Cell division protein MukB (1488 aa)
   
          0.447
UMN179_00006
Hypothetical protein (465 aa)
   
          0.440
UMN179_00576
Hypothetical protein (472 aa)
   
          0.438
trpR
Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription (99 aa)
   
          0.436
UMN179_00055
Xanthine/uracil/thiamine/ascorbate permease family protein (435 aa)
              0.431
UMN179_00924
Universal stress protein UspC; Required for resistance to DNA-damaging agents (142 aa)
   
          0.425
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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