STRINGSTRING
UMN179_00063 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00063" - Putative TRAP system solute receptor protein in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00063Putative TRAP system solute receptor protein (319 aa)    
Predicted Functional Partners:
UMN179_00062
Putative TRAP system permease (883 aa)
   
    0.990
UMN179_01527
DctM-like transporter protein (658 aa)
   
    0.928
UMN179_00061
Universal stress protein (142 aa)
 
          0.786
UMN179_01027
Sodium/glutamate symporter (404 aa)
            0.528
UMN179_01525
Alkanesulfonate transporter substrate-binding subunit (344 aa)
   
   
 
0.528
UMN179_00065
Hypothetical protein (106 aa)
              0.513
UMN179_00064
tRNA pseudouridine synthase C (242 aa)
              0.513
UMN179_00066
Putative Zn-ribbon-containing nucleic-acid-binding protein (263 aa)
              0.400
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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