STRINGSTRING
UMN179_00108 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00108" - Choline transport protein BetT in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00108Choline transport protein BetT (666 aa)    
Predicted Functional Partners:
UMN179_00047
Hypothetical protein (174 aa)
       
      0.578
UMN179_01259
Peptidase family M48 (257 aa)
 
 
      0.518
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (153 aa)
              0.466
htpX
Heat shock protein HtpX (287 aa)
     
      0.436
UMN179_01656
Gamma-aminobutyraldehyde dehydrogenase (495 aa)
   
   
  0.418
UMN179_01161
Succinate-semialdehyde dehydrogenase I (478 aa)
   
   
  0.418
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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