STRINGSTRING
UMN179_00122 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00122" - Long chain fatty acid CoA ligase in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00122Long chain fatty acid CoA ligase (600 aa)    
Predicted Functional Partners:
UMN179_02152
long-chain-fatty-acid-CoA ligase (565 aa)
 
 
0.854
UMN179_01473
Multifunctional fatty acid oxidation complex subunit alpha (715 aa)
   
 
  0.807
UMN179_02005
O-succinylbenzoic acid--CoA ligase (481 aa)
 
 
0.735
UMN179_01472
3-ketoacyl-CoA thiolase (435 aa)
 
   
  0.671
UMN179_02003
Hypothetical protein (262 aa)
   
  0.602
menH
acyl-CoA thioester hydrolase YfbB; Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) (243 aa)
   
  0.602
UMN179_01460
Putative transporter (594 aa)
     
 
  0.566
UMN179_01117
Putative transporter (586 aa)
     
 
  0.566
UMN179_01404
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase (871 aa)
   
 
  0.544
UMN179_00124
Oligopeptide ABC transporter ATP-binding protein (331 aa)
              0.536
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
Server load: low (6%) [HD]