STRINGSTRING
UMN179_00195 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00195" - Putative transcriptional regulator in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00195Putative transcriptional regulator (126 aa)    
Predicted Functional Partners:
UMN179_00197
Hypothetical protein (68 aa)
              0.738
UMN179_00196
Hypothetical protein (78 aa)
              0.738
UMN179_00198
Hypothetical protein (125 aa)
              0.658
UMN179_00209
Phage tail tube protein FII (168 aa)
   
          0.648
UMN179_00210
Phage tail sheath protein (399 aa)
   
          0.642
UMN179_00216
Phage protein (110 aa)
   
          0.628
UMN179_00194
Hypothetical protein (62 aa)
              0.622
UMN179_00215
Phage baseplate J-like protein (303 aa)
   
          0.584
UMN179_00193
Hypothetical protein (42 aa)
              0.583
UMN179_00205
Phage late control gene D protein (379 aa)
   
          0.577
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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