STRINGSTRING
UMN179_00227 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00227" - Phage virion morphogenesis family in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00227Phage virion morphogenesis family (100 aa)    
Predicted Functional Partners:
UMN179_00228
P2 phage tail completion protein R (163 aa)
 
          0.967
UMN179_00234
Phage head completion protein (152 aa)
 
          0.892
UMN179_00233
Phage Tail Protein X (75 aa)
 
          0.880
UMN179_00235
Phage small terminase subunit (250 aa)
 
          0.873
UMN179_00236
Phage major capsid protein, P2 family (353 aa)
 
          0.869
UMN179_00237
Phage capsid scaffolding protein (295 aa)
 
          0.865
UMN179_00229
Hypothetical protein (70 aa)
              0.859
UMN179_00239
Phage portal protein (332 aa)
 
          0.842
UMN179_00238
Terminase-like family protein (590 aa)
 
          0.841
UMN179_00206
Phage P2 protein GpU (146 aa)
   
          0.775
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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