STRINGSTRING
UMN179_00238 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00238" - Terminase-like family protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00238Terminase-like family protein (590 aa)    
Predicted Functional Partners:
UMN179_00239
Phage portal protein (332 aa)
 
     
  0.978
UMN179_00237
Phage capsid scaffolding protein (295 aa)
 
        0.941
UMN179_00236
Phage major capsid protein, P2 family (353 aa)
 
        0.937
UMN179_02482
Phage portal protein (339 aa)
 
     
  0.935
UMN179_00235
Phage small terminase subunit (250 aa)
 
        0.935
UMN179_00234
Phage head completion protein (152 aa)
 
          0.887
UMN179_00228
P2 phage tail completion protein R (163 aa)
 
        0.863
UMN179_02486
Phage major capsid protein, P2 family (337 aa)
 
        0.855
UMN179_00217
Phage-related baseplate assembly protein (208 aa)
 
   
  0.848
UMN179_00227
Phage virion morphogenesis family (100 aa)
 
          0.841
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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