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UMN179_00246 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00246" - L,D-transpeptidase catalytic domain-containing protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00246L,D-transpeptidase catalytic domain-containing protein (469 aa)    
Predicted Functional Partners:
UMN179_00245
Twin-arginine translocation protein (186 aa)
 
          0.914
UMN179_00247
Carboxy-terminal protease (669 aa)
 
          0.637
UMN179_00920
Sulfur transfer complex subunit TusD (126 aa)
   
          0.515
UMN179_00244
Hydroxyacylglutathione hydrolase (216 aa)
              0.475
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Cell wall formation (236 aa)
   
        0.472
UMN179_02214
Putative protoheme IX biogenesis protein (421 aa)
   
          0.426
UMN179_01476
ADP-ribose pyrophosphatase NudF (210 aa)
   
          0.425
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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