STRINGSTRING
UMN179_00250 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00250" - Paraquat-inducible protein B in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00250Paraquat-inducible protein B (885 aa)    
Predicted Functional Partners:
UMN179_00249
Paraquat-inducible protein A (410 aa)
 
   
  0.976
UMN179_01816
Chloride channel protein (464 aa)
       
      0.783
UMN179_01508
Opacity-associated protein A LysM-like domain-containing protein (406 aa)
   
          0.613
proQ
Putative solute/DNA competence effector protein; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities (218 aa)
              0.518
UMN179_02177
Virulence factor hemolysin (211 aa)
   
          0.497
UMN179_01114
Hypothetical protein (197 aa)
   
          0.489
UMN179_01936
Arylsulfatase (593 aa)
   
          0.486
UMN179_02193
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The exact function of the psi subunit is unknown (144 aa)
   
          0.485
UMN179_01425
Hypothetical protein (315 aa)
   
          0.482
UMN179_00887
TfoX C-terminal domain-containing protein (214 aa)
   
          0.482
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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