STRINGSTRING
UMN179_00274 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00274" - Short chain dehydrogenase in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00274Short chain dehydrogenase (296 aa)    
Predicted Functional Partners:
argR
Arginine repressor; Regulates arginine biosynthesis genes (216 aa)
              0.795
UMN179_01839
Thioredoxin-dependent thiol peroxidase (154 aa)
   
        0.661
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (310 aa)
   
        0.628
UMN179_00093
Hypothetical protein (250 aa)
   
        0.616
UMN179_00275
Hypothetical protein (585 aa)
 
          0.583
rpmI
50S ribosomal protein L35 (65 aa)
     
        0.489
UMN179_01863
Phosphate transporter family (419 aa)
     
        0.442
UMN179_00271
Branched-chain amino acid aminotransferase (338 aa)
              0.413
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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