STRINGSTRING
UMN179_00290 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00290" - Hypothetical protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00290Hypothetical protein (220 aa)    
Predicted Functional Partners:
UMN179_00289
Sulfur transfer protein TusE; Part of a sulfur-relay system (111 aa)
   
        0.686
UMN179_01658
Periplasmic negative regulator of sigmaE (317 aa)
   
        0.558
UMN179_00288
Zinc/manganese ABC transporter periplasmic protein (293 aa)
              0.436
UMN179_00831
DNA polymerase I (925 aa)
              0.436
UMN179_00287
Zinc/manganese ABC transporter ATP-binding protein (292 aa)
              0.433
UMN179_00286
Zinc/manganese ABC transporter membrane protein (283 aa)
              0.432
UMN179_00285
Zinc/manganese ABC transporter membrane protein (279 aa)
              0.427
UMN179_01508
Opacity-associated protein A LysM-like domain-containing protein (406 aa)
   
          0.415
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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