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UMN179_00315 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00315" - Site-specific tyrosine recombinase XerC in Gallibacterium anatis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00315Site-specific tyrosine recombinase XerC (312 aa)    
Predicted Functional Partners:
UMN179_00316
Putative helicase (646 aa)
          0.898
UMN179_00338
Integrating conjugative element protein (291 aa)
   
        0.695
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (868 aa)
   
   
  0.654
UMN179_00339
Integrating conjugative element protein (221 aa)
   
        0.653
UMN179_00336
Conjugative transfer region lipoprotein (129 aa)
   
        0.640
UMN179_00378
Hypothetical protein (449 aa)
   
        0.619
UMN179_00337
Integrating conjugative element protein (485 aa)
   
        0.619
UMN179_00324
Integrating conjugative element protein (655 aa)
 
        0.613
UMN179_00343
Integrative conjugative element protein (111 aa)
   
          0.560
UMN179_00317
Hypothetical protein (1336 aa)
              0.549
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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