STRINGSTRING
UMN179_00342 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_00342" - Integrating conjugative element protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_00342Integrating conjugative element protein (78 aa)    
Predicted Functional Partners:
UMN179_00343
Integrative conjugative element protein (111 aa)
              0.859
UMN179_00341
Integrating conjugative element membrane protein (122 aa)
              0.819
UMN179_00340
Conjugative transfer region protein (117 aa)
              0.756
UMN179_00339
Integrating conjugative element protein (221 aa)
              0.756
UMN179_00338
Integrating conjugative element protein (291 aa)
              0.756
UMN179_00337
Integrating conjugative element protein (485 aa)
              0.756
UMN179_00336
Conjugative transfer region lipoprotein (129 aa)
              0.684
UMN179_00335
F pilus assembly Type-IV secretion system for plasmid transfer (915 aa)
              0.662
UMN179_00334
Hypothetical protein (145 aa)
              0.662
UMN179_00333
Hypothetical protein (101 aa)
              0.535
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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